RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 HOXA6P31267 233 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 PTPN7P35236 360 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TNFRSF4P43489 277 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 DGKGP49619 791 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 IRAK1P51617 712 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 DPYSQ14117 519 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ALFQ53S48 1182 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TTC39BQ5VTQ0 682 aaPredicted RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 SDE2Q6IQ49 451 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TFAP2DQ7Z6R9 452 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ADAT2Q7Z6V5 191 aaKnown RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 VSIG1Q86XK7 387 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 SLC13A5Q86YT5 568 aaPredicted RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 ZNF683Q8IZ20 524 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 CARNMT1Q8N4J0 409 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 ALLCQ8N6M5 410 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 GPR161Q8N6U8 529 aaKnown RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 ZNF513Q8N8E2 541 aaPredicted RBP13.77□□□□□ -0.21
MSH6-208ENST00000493177 TERB1Q8NA31 727 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 PCDH19Q8TAB3 1148 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 GAB3Q8WWW8 586 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 FAF2Q96CS3 445 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 MS4A14Q96JA4 679 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 TPSD1Q9BZJ3 242 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 PLK2Q9NYY3 685 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 MMP17Q9ULZ9 603 aa13.77□□□□□ -0.21
MSH6-208ENST00000493177 IGLV3-10A0A075B6K4 115 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.76□□□□□ -0.21
MSH6-208ENST00000493177 H0Y626 953 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 CES2O00748 559 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 HOXC13P31276 330 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 PAFAH1B1P43034 410 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 CDH4P55283 916 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 ZNF177Q13360 481 aaPredicted RBP13.76□□□□□ -0.21
MSH6-208ENST00000493177 TAZQ16635 292 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 C5orf22Q49AR2 442 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 HSF5Q4G112 596 aaPredicted RBP13.76□□□□□ -0.21
MSH6-208ENST00000493177 ETFBKMTQ8IXQ9 262 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 PQLC3Q8N755 202 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 RTL3Q8N8U3 475 aaKnown RBP13.76□□□□□ -0.21
MSH6-208ENST00000493177 MAIP1Q8WWC4 291 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 HAUS1Q96CS2 278 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 NAP1L3Q99457 506 aaPredicted RBP13.76□□□□□ -0.21
MSH6-208ENST00000493177 ZDHHC4Q9NPG8 344 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 ETNK2Q9NVF9 386 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 SMARCAL1Q9NZC9 954 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 MARK1Q9P0L2 795 aa13.76□□□□□ -0.21
MSH6-208ENST00000493177 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 MYO18AQ92614 2054 aaKnown RBP13.75□□□□□ -0.21
MSH6-208ENST00000493177 THADAQ6YHU6 1953 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 A0A1B0GVM2 712 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 TCAF2A6NFQ2 919 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 PGRMC1O00264 195 aaKnown RBP13.75□□□□□ -0.21
MSH6-208ENST00000493177 DCLK1O15075 740 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CACNG3O60359 315 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CLDN11O75508 207 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 RHOCP08134 193 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 OR1E1P30953 314 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 SERPINB6P35237 376 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 ID4P47928 161 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CDH18Q13634 790 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 ELF2Q15723 593 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CRY1Q16526 586 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
MSH6-208ENST00000493177 EMC10Q5UCC4 262 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 NCBP2-AS2Q69YL0 99 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 SLC9A4Q6AI14 798 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CHST9Q7L1S5 443 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 ZNF354CQ86Y25 554 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 MFN1Q8IWA4 741 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 SFTPA1Q8IWL2 248 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 RASGEF1CQ8N431 466 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 HERPUD2Q9BSE4 406 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 PRDM16Q9HAZ2 1276 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 TMEM248Q9NWD8 314 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 CDC23Q9UJX2 597 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 NEU3Q9UQ49 428 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 EFR3BQ9Y2G0 817 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 MFHAS1Q9Y4C4 1052 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 HEY1Q9Y5J3 304 aa13.75□□□□□ -0.21
MSH6-208ENST00000493177 TCRBV7S2A1N4TA0A589 114 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 TCRBV21S2A2A0A5A6 115 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 WASH4PA8MWX3 477 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 SGK1O00141 431 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 GFRA2O00451 464 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 LUC7L3O95232 432 aaKnown RBP13.74□□□□□ -0.21
MSH6-208ENST00000493177 RETP07949 1114 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 HOXB2P14652 356 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 TGM2P21980 687 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 WASP42768 502 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 MAPKAPK2P49137 400 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 CKAP4Q07065 602 aaKnown RBP13.74□□□□□ -0.21
MSH6-208ENST00000493177 ADCY2Q08462 1091 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 MESP2Q0VG99 397 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 C6orf118Q5T5N4 469 aa13.74□□□□□ -0.21
MSH6-208ENST00000493177 FYB2Q5VWT5 728 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms