RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ZNF354CQ86Y25 554 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 CACUL1Q86Y37 369 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 TMPRSS6Q8IU80 811 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 TEKT4Q8WW24 435 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 PRCCQ92733 491 aaPredicted RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 SIPA1Q96FS4 1042 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 MKRN2Q9H000 416 aaKnown RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 MAGEH1Q9H213 219 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 PRSS16Q9NQE7 514 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 HPCAL4Q9UM19 191 aa13.09□□□□□ -0.31
CLIP2-209ENST00000493166 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
CLIP2-209ENST00000493166 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 PRR23AA6NEV1 266 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 DCLK1O15075 740 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 SIN3BO75182 1162 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ZNF217O75362 1048 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ACADMP11310 421 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ACVRL1P37023 503 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ARL4AP40617 200 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 P2RY2P41231 377 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 GSDMDP57764 484 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 KRT81Q14533 505 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 LPAL2Q16609 132 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 LINGO4Q6UY18 593 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 RAD9BQ6WBX8 426 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ALYREFQ86V81 257 aaKnown RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 CPNE8Q86YQ8 564 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 SH2D3CQ8N5H7 860 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ATP11CQ8NB49 1132 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ARHGEF2Q92974 986 aaKnown RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
CLIP2-209ENST00000493166 HS3ST2Q9Y278 367 aa13.08□□□□□ -0.32
CLIP2-209ENST00000493166 ZFHX2Q9C0A1 2572 aaPredicted RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ATP9BO43861 1147 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 RNASEH1O60930 286 aaKnown RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 MT-CO1P00395 513 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 SRCP12931 536 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 VAV1P15498 845 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ERCC2P18074 760 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 HCAR3P49019 387 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 SERPINH1P50454 418 aaKnown RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 CDH6P55285 790 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ARF5P84085 180 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 TCEAL1Q15170 157 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 DLG2Q15700 870 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ELF2Q15723 593 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 PARP15Q460N3 678 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ZFYVE27Q5T4F4 411 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 C9orf64Q5T6V5 341 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ASCL5Q7RTU5 278 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 TMEM139Q8IV31 216 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 SUMF1Q8NBK3 374 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 ACE2Q9BYF1 805 aaPredicted RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 NOL6Q9H6R4 1146 aaKnown RBP13.07□□□□□ -0.32
CLIP2-209ENST00000493166 PCDH18Q9HCL0 1135 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 TFR2Q9UP52 801 aa13.07□□□□□ -0.32
CLIP2-209ENST00000493166 NUMA1Q14980 2115 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 RASA4BC9J798 803 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 K7ERQ8 282 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 MAP3K13O43283 966 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 RASA4O43374 803 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 BNIP3LO60238 219 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 GFRA3O60609 400 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 DNTTP04053 509 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 KRT7P08729 469 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 BCKDHBP21953 392 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 MRE11P49959 708 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 CLCN6P51797 869 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 NDST2P52849 883 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 GEMIN4P57678 1058 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 TAS2R40P59535 323 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 RPS14P62263 151 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 SLC20A2Q08357 652 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 DPYSQ14117 519 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 ELAVL3Q14576 367 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 TTC31Q49AM3 519 aaPredicted RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 LAIR1Q6GTX8 287 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 Q6ZVU0 165 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 POLNQ7Z5Q5 900 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 KIAA1328Q86T90 577 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 METTL3Q86U44 580 aaKnown RBP13.06□□□□□ -0.32
CLIP2-209ENST00000493166 UMODL1-AS1Q8N2C9 162 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 STK40Q8N2I9 435 aa13.06□□□□□ -0.32
CLIP2-209ENST00000493166 FAM160A2Q8N612 972 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms