RNA–Protein interactions for RNA: ENST00000492806.5

CCDC13-208, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 1,267 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-208ENST00000492806 NDFIP2Q9NV92 336 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 FAM86C1Q9NVL1 165 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 C2orf42Q9NWW7 574 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 EBF1Q9UH73 591 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 VPS51Q9UID3 782 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 HPCAL4Q9UM19 191 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 HS3ST2Q9Y278 367 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 DUSP10Q9Y6W6 482 aa17.14■□□□□ 0.33
CCDC13-208ENST00000492806 A0A1W2PQF6 199 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 TARSL2A2RTX5 802 aaKnown RBP17.13■□□□□ 0.33
CCDC13-208ENST00000492806 DCLK1O15075 740 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 ATP9BO43861 1147 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 EPHX1P07099 455 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 PRKCHP24723 683 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 SERPINB6P35237 376 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 CAMK2GQ13555 558 aaPredicted RBP17.13■□□□□ 0.33
CCDC13-208ENST00000492806 DPYSL3Q14195 570 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 HNRNPA1L2Q32P51 320 aaKnown RBP17.13■□□□□ 0.33
CCDC13-208ENST00000492806 ATP13A4Q4VNC1 1196 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 ODF2Q5BJF6 829 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 RASSF3Q86WH2 238 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 SYCE1Q8N0S2 351 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 ZSCAN32Q9NX65 697 aa17.13■□□□□ 0.33
CCDC13-208ENST00000492806 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC13-208ENST00000492806 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 ARHGAP42A6NI28 874 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 WASH3PC4AMC7 463 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 RASA4BC9J798 803 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 RASA4O43374 803 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 ZMPSTE24O75844 475 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 KDELR1P24390 212 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 CTSOP43234 321 aaPredicted RBP17.12■□□□□ 0.33
CCDC13-208ENST00000492806 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 METTL3Q86U44 580 aaKnown RBP17.12■□□□□ 0.33
CCDC13-208ENST00000492806 WDR5BQ86VZ2 330 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 SH2D3CQ8N5H7 860 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 CASKIN2Q8WXE0 1202 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 FAF2Q96CS3 445 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 HHIPQ96QV1 700 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 CALN1Q9BXU9 219 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 NOL6Q9H6R4 1146 aaKnown RBP17.12■□□□□ 0.33
CCDC13-208ENST00000492806 LRRC19Q9H756 370 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 CD248Q9HCU0 757 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 PCDHGA2Q9Y5H1 932 aa17.12■□□□□ 0.33
CCDC13-208ENST00000492806 NYNRINQ9P2P1 1898 aaKnown RBP17.12■□□□□ 0.33
CCDC13-208ENST00000492806 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 TCRBV21S2A2A0A5A6 115 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 PROB1E7EW31 1015 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 CBX4O00257 560 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 KDELR3O43731 214 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 SNAP91O60641 907 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 C7P10643 843 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 AMPD1P23109 780 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 IL4RP24394 825 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 CNR2P34972 360 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 ACVRL1P37023 503 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 NBL1P41271 181 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 SERINC3Q13530 473 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 AFMIDQ63HM1 303 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 ZC3H14Q6PJT7 736 aaKnown RBP17.11■□□□□ 0.33
CCDC13-208ENST00000492806 LRRC57Q8N9N7 239 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 ZBTB44Q8NCP5 570 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 OR2T3Q8NH03 318 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 RPL10LQ96L21 214 aaKnown RBP17.11■□□□□ 0.33
CCDC13-208ENST00000492806 PHOX2BQ99453 314 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 CEP44Q9C0F1 390 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 KLC2Q9H0B6 622 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 SLCO3A1Q9UIG8 710 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 HYOU1Q9Y4L1 999 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 EML5Q05BV3 1969 aa17.11■□□□□ 0.33
CCDC13-208ENST00000492806 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 GRID2IPA4D2P6 1211 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 AXIN1O15169 862 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 GFRA3O60609 400 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 KRT1P04264 644 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 SRCP12931 536 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 HLA-EP13747 358 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 STK19P49842 368 aaPredicted RBP17.1■□□□□ 0.33
CCDC13-208ENST00000492806 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 ANKRD20A8PQ5CZ79 823 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 ANO7Q6IWH7 933 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 TSSK4Q6SA08 328 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 LRRC49Q8IUZ0 686 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 KATNAL2Q8IYT4 538 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 ATP11CQ8NB49 1132 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 FRS2Q8WU20 508 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 RAPGEF5Q92565 580 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 HMCESQ96FZ2 354 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 RBM41Q96IZ5 413 aaKnown RBP17.1■□□□□ 0.33
CCDC13-208ENST00000492806 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 RNF157Q96PX1 679 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
CCDC13-208ENST00000492806 TRIM10Q9UDY6 481 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 AMFRQ9UKV5 643 aa17.1■□□□□ 0.33
CCDC13-208ENST00000492806 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms