RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 NEK5Q6P3R8 708 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 TMC6Q7Z403 805 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 FAM174AQ8TBP5 190 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 RNF34Q969K3 372 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 IFT43Q96FT9 208 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 CCDC114Q96M63 670 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 POLR1BQ9H9Y6 1135 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 POPDC2Q9HBU9 364 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 METTL14Q9HCE5 456 aaKnown RBP11.32□□□□□ -0.6
SND1-215ENST00000492772 THSD1Q9NS62 852 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.32□□□□□ -0.6
SND1-215ENST00000492772 NLGN3Q9NZ94 848 aa11.32□□□□□ -0.6
SND1-215ENST00000492772 DOCK9Q9BZ29 2069 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 RIOK3O14730 519 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 CSO75390 466 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 PIAS2O75928 621 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 ZNF202O95125 648 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 HNRNPA2B1P22626 353 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 PRCPP42785 496 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 GPD2P43304 727 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 YWHAZP63104 245 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 GCNT1Q02742 428 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 CETN1Q12798 172 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 MTA1Q13330 715 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 POM121L1PQ3SYA9 428 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 PIP5KL1Q5T9C9 394 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 ARHGAP40Q5TG30 622 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 ZNF658Q5TYW1 1059 aaPredicted RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 CXorf57Q6NSI4 855 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 IGF2-ASQ6U949 168 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 Q6ZVU0 165 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 CIR1Q86X95 450 aaPredicted RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 FAM181AQ8N9Y4 354 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 SNRNP27Q8WVK2 155 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 PRMT1Q99873 361 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 DUSP23Q9BVJ7 150 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 CALN1Q9BXU9 219 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 GTPBP4Q9BZE4 634 aaKnown RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 FAM204AQ9H8W3 233 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 CPNE5Q9HCH3 593 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 UCKL1Q9NWZ5 548 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 VPS28Q9UK41 221 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 CA5BQ9Y2D0 317 aa11.31□□□□□ -0.6
SND1-215ENST00000492772 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
SND1-215ENST00000492772 A0A1W2PQU0 124 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 NEMP2A6NFY4 417 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 SLC31A1O15431 190 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 P4HA2O15460 535 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 KLK10O43240 276 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 C6P13671 934 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 PRLRP16471 622 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 CCR1P32246 355 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 NUMBP49757 651 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 TAS2R38P59533 333 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 VAC14Q08AM6 782 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 DLG2Q15700 870 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 ANKRD40Q6AI12 368 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 HORMAD1Q86X24 394 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 DCP2Q8IU60 420 aaKnown RBP11.3□□□□□ -0.6
SND1-215ENST00000492772 SH2D3CQ8N5H7 860 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 OR13H1Q8NG92 308 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 KAT5Q92993 513 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 GRAMD1AQ96CP6 724 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 VCPIP1Q96JH7 1222 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 APOLD1Q96LR9 279 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 RPRD1AQ96P16 312 aaPredicted RBP11.3□□□□□ -0.6
SND1-215ENST00000492772 MED15Q96RN5 788 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 MYOCQ99972 504 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 FEM1AQ9BSK4 669 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 SLC4A5Q9BY07 1137 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 SCAND2PQ9GZW5 306 aaPredicted RBP11.3□□□□□ -0.6
SND1-215ENST00000492772 ABCG4Q9H172 646 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 GOLPH3LQ9H4A5 285 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 ASCL3Q9NQ33 180 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 DYRK4Q9NR20 520 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 NCKIPSDQ9NZQ3 722 aa11.3□□□□□ -0.6
SND1-215ENST00000492772 COL27A1Q8IZC6 1860 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 TRIM49BA6NDI0 452 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 A6NNZ2 444 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 B8ZZF3 427 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 E5RJQ4 531 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 KPNA3O00505 521 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 SCAMP1O15126 338 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 MED7O43513 233 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 BNIP3LO60238 219 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CLDN11O75508 207 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CALCAP01258 141 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CENPBP07199 599 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 GIMD1P0DJR0 217 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 PMS1P54277 932 aaKnown RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 HNRNPKP61978 463 aaKnown RBP eCLIP11.29□□□□□ -0.6
SND1-215ENST00000492772 CDK17Q00537 523 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 CENPCQ03188 943 aa11.29□□□□□ -0.6
SND1-215ENST00000492772 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
SND1-215ENST00000492772 PNOCQ13519 176 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms