RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 TBC1D14Q9P2M4 693 aa5□□□□□ -1.61
RTN4-215ENST00000491592 HSFX1Q9UBD0 423 aa5□□□□□ -1.61
RTN4-215ENST00000491592 MORF4L1Q9UBU8 362 aa5□□□□□ -1.61
RTN4-215ENST00000491592 MED16Q9Y2X0 877 aa5□□□□□ -1.61
RTN4-215ENST00000491592 N6AMT1Q9Y5N5 214 aa5□□□□□ -1.61
RTN4-215ENST00000491592 SNX14Q9Y5W7 946 aa5□□□□□ -1.61
RTN4-215ENST00000491592 CYP46A1Q9Y6A2 500 aa5□□□□□ -1.61
RTN4-215ENST00000491592 MSH6P52701 1360 aa5□□□□□ -1.61
RTN4-215ENST00000491592 TMEM94Q12767 1356 aa5□□□□□ -1.61
RTN4-215ENST00000491592 ITSN1Q15811 1721 aa5□□□□□ -1.61
RTN4-215ENST00000491592 TTC21BQ7Z4L5 1316 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TTC21AQ8NDW8 1320 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 YTHDC2Q9H6S0 1430 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 N4BP2Q86UW6 1770 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 ARPC4-TTLL3A0A0A6YYG9 625 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 GOLGA6L10A0A0M3HER8 536 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 GAGE12BA1L429 117 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 GAGE12HA6NDE8 117 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 LGALS16A8MUM7 142 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 MYO1FO00160 1098 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 HIP1O00291 1037 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 RNASET2O00584 256 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 HNRNPDLO14979 420 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 NPC1O15118 1278 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SPTLC2O15270 562 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 ASAP2O43150 1006 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 RIPK2O43353 540 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CEP104O60308 925 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 KERAO60938 352 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 NCR1O76036 304 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 STAMBPO95630 424 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CFIP05156 583 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CCDC172P0C7W6 258 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 PNMA6AP0CW24 399 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 TMIGD3P0DMS9 266 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 CAPN2P17655 700 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 IL10P22301 178 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 EEF1GP26641 437 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 GJB2P29033 226 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 HOXA11P31270 313 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 ARL3P36405 182 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 USP8P40818 1118 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 INHBEP58166 350 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SLC26A5P58743 744 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SLC25A3Q00325 362 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 PIGFQ07326 219 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SLC14A1Q13336 389 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 DAG1Q14118 895 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 HABP2Q14520 560 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 STX1AQ16623 288 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CTXN3Q4LDR2 81 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TTC39AQ5SRH9 613 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 LUZP1Q86V48 1076 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 MAPKAPK5Q8IW41 473 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TAGAPQ8N103 731 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 ZNF276Q8N554 614 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 IQUBQ8NA54 791 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 KCTD6Q8NC69 237 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 ZBTB44Q8NCP5 570 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CREB3L4Q8TEY5 395 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TBC1D22AQ8WUA7 517 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 KBTBD7Q8WVZ9 684 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 ANKS1AQ92625 1134 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 NAF1Q96HR8 494 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 C1orf74Q96LT6 269 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 PLEKHG4BQ96PX9 1271 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TMEM237Q96Q45 408 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 SLC39A3Q9BRY0 314 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 CRACR2AQ9BSW2 395 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 LSG1Q9H089 658 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 COPS7BQ9H9Q2 264 aaPredicted RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 SAYSD1Q9NPB0 183 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 AKIP1Q9NQ31 210 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 ANO10Q9NW15 660 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 HYPKQ9NX55 129 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 RNF181Q9P0P0 153 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 KCNE5Q9UJ90 142 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 PCDHGB4Q9UN71 923 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 AGAP1Q9UPQ3 857 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 NOSIPQ9Y314 301 aaKnown RBP4.99□□□□□ -1.61
RTN4-215ENST00000491592 FPGT-TNNI3KV9GXZ4 949 aa4.99□□□□□ -1.61
RTN4-215ENST00000491592 TTC41PQ6P2S7 1318 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 USP42Q9H9J4 1324 aaKnown RBP4.98□□□□□ -1.61
RTN4-215ENST00000491592 NPATQ14207 1427 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 EDC4Q6P2E9 1401 aaKnown RBP4.98□□□□□ -1.61
RTN4-215ENST00000491592 A0A0G2JPF8 293 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 CTAGE9A4FU28 777 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 BECN2A8MW95 431 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 EFCAB8A8MWE9 144 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 HNRNPCL3B7ZW38 293 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 TAF4O00268 1085 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 UBE2CO00762 179 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 PLSCR1O15162 318 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 SYNCRIPO60506 623 aaKnown RBP4.98□□□□□ -1.61
RTN4-215ENST00000491592 RTN2O75298 545 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 ERAL1O75616 437 aaKnown RBP4.98□□□□□ -1.61
RTN4-215ENST00000491592 PIAS2O75928 621 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 DNAJB5O75953 348 aa4.98□□□□□ -1.61
RTN4-215ENST00000491592 UNC5CO95185 931 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms