RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 ATP6V0A2Q9Y487 856 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 ENTPD2Q9Y5L3 495 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 COL4A3BPQ9Y5P4 624 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CFAP20Q9Y6A4 193 aaKnown RBP2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 DOCK2Q92608 1830 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 KIF1AQ12756 1690 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 CAMTA1Q9Y6Y1 1673 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 LAMB4A4D0S4 1761 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 FER1L4A9Z1Z3 1794 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 UBR2Q8IWV8 1755 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 DLEC1Q9Y238 1755 aa2.18□□□□□ -2.06
SNRNP40-207ENST00000491106 MROH7-TTC4A0A0A0MT08 1334 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF804BA4D1E1 1349 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ATP8B3O60423 1300 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ATXN2Q99700 1313 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NUP188Q5SRE5 1749 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PKD1L3Q7Z443 1732 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TRPM3Q9HCF6 1732 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP3A7-CYP3A51PA0A087WV96 503 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 A0A087X0T9 212 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GPR75-ASB3A0A0A6YYF3 556 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 hCG_1642624A0A1W2PR95 340 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MACROD2A1Z1Q3 448 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GTPBP10A4D1E9 387 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TRIM49BA6NDI0 452 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MYMKA6NI61 221 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF233A6NK53 670 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCT8L1PA6NM43 557 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TARM1B6A8C7 271 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ALG1L2C9J202 215 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 E7ENX8 843 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 H0YGN5 161 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 F2RL2O00254 374 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CLGNO14967 610 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ZNF263O14978 683 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TBX3O15119 743 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CYTH3O43739 400 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CALUO43852 315 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 KIF1CO43896 1103 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RBMXL2O75526 392 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PALMO75781 387 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RASSF9O75901 435 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SOAT2O75908 522 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ATP5HO75947 161 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 JTBO76095 146 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NOL4O94818 638 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CAMTA2O94983 1202 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MOCS3O95396 460 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PLEKHA8P1O95397 391 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CHEK2O96017 543 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 H2AFZP0C0S5 128 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FAM228BP0C875 321 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PRR35P0CG20 571 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GZMAP12544 262 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GCFC2P16383 781 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FERP16591 822 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 HSPA6P17066 643 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ENGP17813 658 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TNFAIP3P21580 790 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MUTP22033 750 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 FBLP22087 321 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CYP3A7P24462 503 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TM4SF1P30408 202 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC8A1P32418 973 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MAP2K2P36507 400 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 HSPA9P38646 679 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 PRKCIP41743 596 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 STAT1P42224 750 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MATR3P43243 847 aaKnown RBP eCLIP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GYG1P46976 350 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CCT5P48643 541 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CARSP49589 748 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NAPAP54920 295 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 HADHBP55084 474 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 EEFSECP57772 596 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 POLR2FP61218 127 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ASIC1P78348 528 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GPSM2P81274 684 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 GUCY2DQ02846 1103 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TAP2Q03519 686 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TLE1Q04724 770 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 KLHL30Q0D2K2 578 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SLC10A2Q12908 348 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 ITGB3BPQ13352 177 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 XRCC4Q13426 336 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 RIPK1Q13546 671 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MTMR1Q13613 665 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 E2F2Q14209 437 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 MYBPC2Q14324 1141 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 SLMAPQ14BN4 828 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 LLGL1Q15334 1064 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 CALCRLQ16602 461 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 NFIL3Q16649 462 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 KNOP1Q1ED39 458 aaKnown RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 LETM2Q2VYF4 491 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 EDRF1Q3B7T1 1238 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 HERC4Q5GLZ8 1057 aaPredicted RBP2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 TREML2Q5T2D2 321 aa2.17□□□□□ -2.06
SNRNP40-207ENST00000491106 WLSQ5T9L3 541 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms