RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 ITGA7Q13683 1181 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 R3HDM1Q15032 1099 aaKnown RBP11.37□□□□□ -0.59
VPS72-205ENST00000491094 GEN1Q17RS7 908 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 PLPPR4Q7Z2D5 763 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 ZNF354CQ86Y25 554 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
VPS72-205ENST00000491094 TRIML2Q8N7C3 387 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 DIS3LQ8TF46 1054 aaKnown RBP11.37□□□□□ -0.59
VPS72-205ENST00000491094 SNRNP27Q8WVK2 155 aaKnown RBP11.37□□□□□ -0.59
VPS72-205ENST00000491094 PHF21BQ96EK2 531 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 RNF39Q9H2S5 420 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 DDIT4Q9NX09 232 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
VPS72-205ENST00000491094 H3BRB1 525 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 DNAJA2O60884 412 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 GPC4O75487 556 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 RECQL4O94761 1208 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 IL1BP01584 269 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 MAGEA3P43357 314 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 GK5Q6ZS86 529 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 EXOC8Q8IYI6 725 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 CXorf38Q8TB03 319 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 ACMSDQ8TDX5 336 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 ATP6V1E2Q96A05 226 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 CPNE1Q99829 537 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 FTHL17Q9BXU8 183 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 MRPL1Q9BYD6 325 aaKnown RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 TUT1Q9H6E5 874 aaKnown RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 WDR41Q9HAD4 459 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 UBAP1Q9NZ09 502 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 SORCS3Q9UPU3 1222 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PIN4Q9Y237 131 aaKnown RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 PCDHB12Q9Y5F1 795 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PMPCBO75439 489 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 TKTP29401 623 aaKnown RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 BCAT1P54687 386 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 TMED1Q13445 227 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 DGKDQ16760 1214 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 GRTP1Q5TC63 336 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 TIFABQ6ZNK6 161 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PKP2Q99959 881 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 NUDT5Q9UKK9 219 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 HEMK1Q9Y5R4 338 aaPredicted RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 SNX13Q9Y5W8 968 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 SPTLC1O15269 473 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 HUS1O60921 280 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 INCA1Q0VD86 236 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PCSK7Q16549 785 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 NADK2Q4G0N4 442 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PAN2Q504Q3 1202 aaKnown RBP11.36□□□□□ -0.59
VPS72-205ENST00000491094 MAP3K21Q5TCX8 1036 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 PGM2L1Q6PCE3 622 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 ANKRD52Q8NB46 1076 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 JADE3Q92613 823 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 RBBP8Q99708 897 aa11.36□□□□□ -0.59
VPS72-205ENST00000491094 RGSL1A5PLK6 1076 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 CRTAMO95727 393 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 MT-CYBP00156 380 aaPredicted RBP11.35□□□□□ -0.59
VPS72-205ENST00000491094 TKTL1P51854 596 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SLC12A2P55011 1212 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 MTTPP55157 894 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 CEACAM7Q14002 265 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 FBXO47Q5MNV8 452 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 EPGNQ6UW88 154 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 RNF169Q8NCN4 708 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 Q9H521 79 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 PIGVQ9NUD9 493 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 DNAJC28Q9NX36 388 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SF3B1O75533 1304 aaKnown RBP eCLIP11.35□□□□□ -0.59
VPS72-205ENST00000491094 KCNU1A8MYU2 1149 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SOCS7O14512 581 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 RPL10P27635 214 aaKnown RBP11.35□□□□□ -0.59
VPS72-205ENST00000491094 ETFBP38117 255 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 RPL14P50914 215 aaKnown RBP11.35□□□□□ -0.59
VPS72-205ENST00000491094 MPP1Q00013 466 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SH2D4BQ5SQS7 431 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SLC26A9Q7LBE3 791 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 PSTKQ8IV42 348 aaKnown RBP11.35□□□□□ -0.59
VPS72-205ENST00000491094 NXNL1Q96CM4 212 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 XPR1Q9UBH6 696 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 ZNF112Q9UJU3 913 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 PSMD13Q9UNM6 376 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 CDYLQ9Y232 598 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 H3BNX3 289 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 ZNF195O14628 629 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 HDAC3O15379 428 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 USP17L7P0C7H9 530 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 MATKP42679 507 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 USP46P62068 366 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 APOBEC3FQ8IUX4 373 aaKnown RBP11.35□□□□□ -0.59
VPS72-205ENST00000491094 APBB2Q92870 758 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 SLC39A3Q9BRY0 314 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 G3V2L1 256 aa11.35□□□□□ -0.59
VPS72-205ENST00000491094 PTPN3P26045 913 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms