RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 GDAQ9Y2T3 454 aa5□□□□□ -1.61
CSTF1-205ENST00000490539 NFE2L3Q9Y4A8 694 aa5□□□□□ -1.61
CSTF1-205ENST00000490539 SF3B1O75533 1304 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SPTBN2O15020 2390 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 A0A087X0B3 334 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 CCDC151A5D8V7 595 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 AKR1B15C9JRZ8 316 aaPredicted RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TULP2O00295 520 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 MAP2K7O14733 419 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 OGTO15294 1046 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 NRP2O60462 931 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ULK1O75385 1050 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 RECQL4O94761 1208 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 CXCL14O95715 111 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 URODP06132 367 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TUBBP07437 444 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 CCDC175P0C221 793 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TRIM21P19474 475 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 PAX3P23760 479 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 RPL9P32969 192 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 PBX1P40424 430 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 NDUFV1P49821 464 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 GATMP50440 423 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SCNN1GP51170 649 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 OSTNP61366 133 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 GNG11P61952 73 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SNRPFP62306 86 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ZXDAP98168 799 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 GTF2BQ00403 316 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 POU5F1Q01860 360 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SLC20A2Q08357 652 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TCF15Q12870 199 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 GPS2Q13227 327 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 STIM1Q13586 685 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 GRM7Q14831 915 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 PRKD1Q15139 912 aaPredicted RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SEPT7Q16181 437 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TBR1Q16650 682 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 USP41Q3LFD5 358 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SPATA1Q5VX52 437 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 USP49Q70CQ1 688 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ZNF720Q7Z2F6 126 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 KANSL1Q7Z3B3 1105 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 DGLUCYQ7Z3D6 616 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SFR1Q86XK3 245 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 VPS52Q8N1B4 723 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 CEP112Q8N8E3 955 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 Q8TCH9 128 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 NOC3LQ8WTT2 800 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 POF1BQ8WVV4 589 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 WDR24Q96S15 920 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TCF25Q9BQ70 676 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 EIF2AQ9BY44 585 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 DNAI2Q9GZS0 605 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ST6GALNAC4Q9H4F1 302 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ZMAT4Q9H898 229 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 KIAA1586Q9HCI6 787 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 POLD4Q9HCU8 107 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ARFGAP3Q9NP61 516 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 BLOC1S4Q9NUP1 217 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 PSD3Q9NYI0 1048 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 MAGEL2Q9UJ55 1249 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 AGO2Q9UKV8 859 aaKnown RBP4.99□□□□□ -1.61
CSTF1-205ENST00000490539 TSC22D4Q9Y3Q8 395 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 HES2Q9Y543 173 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 MTCH2Q9Y6C9 303 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 ARID2Q68CP9 1835 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 SPEGQ15772 3267 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 COL4A6Q14031 1691 aa4.99□□□□□ -1.61
CSTF1-205ENST00000490539 UBE4BO95155 1302 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 ITIH6Q6UXX5 1313 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 MYH11P35749 1972 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 VPS13AQ96RL7 3174 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 MYO18BQ8IUG5 2567 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 A0A0A6YYJ9 748 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 A0A1W2PRX2 142 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 MYMKA6NI61 221 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 NRP1O14786 923 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 GRM6O15303 877 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 INPPL1O15357 1258 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 EIF3DO15371 548 aaKnown RBP eCLIP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 FOXS1O43638 330 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 BRINP1O60477 761 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 OPHN1O60890 802 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 B3GAT3O94766 335 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 SEC31AO94979 1220 aaKnown RBP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 CSPG5O95196 566 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 PCDH8O95206 1070 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 IL18RAPO95256 599 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 PIGRP01833 764 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 ITGB1P05556 798 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 GALTP07902 379 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 ATF7P17544 494 aaPredicted RBP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 KLRC2P26717 231 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 OAS2P29728 719 aaKnown RBP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 NMT1P30419 496 aaKnown RBP4.98□□□□□ -1.61
CSTF1-205ENST00000490539 PPP1R2P41236 205 aa4.98□□□□□ -1.61
CSTF1-205ENST00000490539 NRIP1P48552 1158 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms