RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 RETREG1Q9H6L5 497 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 GAREM1Q9H706 876 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 TM7SF3Q9NS93 570 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 PCOLCE2Q9UKZ9 415 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SARDHQ9UL12 918 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 ANKRD6Q9Y2G4 727 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 NEUROG3Q9Y4Z2 214 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 PAXBP1Q9Y5B6 917 aa9.99□□□□□ -0.81
TMEM39A-210ENST00000490099 SYNJ2BP-COX16A0A087WUM0 186 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A1W2PP55 124 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A1W2PR77 199 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 TCRBV5S1A1TA0A578 114 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ILVBLA1L0T0 632 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 LRRC72A6NJI9 287 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 C2CD4BA6NLJ0 364 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ALOX15BO15296 676 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 DFNA5O60443 496 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ZMPSTE24O75844 475 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 GFPT2O94808 682 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 CER1O95813 267 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 MT-CO1P00395 513 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ADRA1BP35368 520 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 GGCXP38435 758 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ADPRHP54922 357 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 RNASE9P60153 205 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 POLR2FP61218 127 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 MYL5Q02045 173 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 DEUP1Q05D60 604 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 FOXC1Q12948 553 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 SYCP1Q15431 976 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 TEAD4Q15561 434 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 TRIP6Q15654 476 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 DLG2Q15700 870 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 C2CD6Q53TS8 623 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM102AQ5T9C2 384 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 MANEALQ5VSG8 457 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 RNF219Q5W0B1 726 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF783Q6ZMS7 281 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 PHF13Q86YI8 300 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 NAXDQ8IW45 347 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ADAMTS14Q8WXS8 1223 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 SCNM1Q9BWG6 230 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 SIK2Q9H0K1 926 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 OSBPL2Q9H1P3 480 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 TMPRSS4Q9NRS4 437 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM207AQ9NSI2 230 aaPredicted RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ANO10Q9NW15 660 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 COX16Q9P0S2 106 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 ARHGAP20Q9P2F6 1191 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 PPARGC1AQ9UBK2 798 aaKnown RBP9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 MSRB2Q9Y3D2 182 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 SNX11Q9Y5W9 270 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 SNX10Q9Y5X0 201 aa9.98□□□□□ -0.81
TMEM39A-210ENST00000490099 FRYQ5TBA9 3013 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 ARID1BQ8NFD5 2236 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A0D9SEW6 157 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 E9PAM4 449 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 WNT9AO14904 365 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 ZNF821O75541 412 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 RNASEH2AO75792 299 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 FSBPO95073 299 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 WNT1P04628 370 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SRCP12931 536 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 RDXP35241 583 aaKnown RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 STAT1P42224 750 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 PTPN9P43378 593 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SULT1E1P49888 294 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 METAP1P53582 386 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 TAS2R38P59533 333 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SLC20A2Q08357 652 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 STX1AQ16623 288 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 CCDC14Q49A88 953 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 FAM46CQ5VWP2 391 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SND1Q7KZF4 910 aaKnown RBP eCLIP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 DSG4Q86SJ6 1040 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SLCO6A1Q86UG4 719 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 DCAF4L2Q8NA75 395 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 OR2A12Q8NGT7 310 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 RXFP2Q8WXD0 754 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 OR8D1Q8WZ84 308 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 VOPP1Q96AW1 172 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 OMDQ99983 421 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 SYT11Q9BT88 431 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 ACE2Q9BYF1 805 aaPredicted RBP9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 VPS51Q9UID3 782 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 VPS28Q9UK41 221 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 DOCK4Q8N1I0 1966 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 CHD6Q8TD26 2715 aa9.97□□□□□ -0.81
TMEM39A-210ENST00000490099 AKAP13Q12802 2813 aa9.96□□□□□ -0.81
TMEM39A-210ENST00000490099 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
TMEM39A-210ENST00000490099 TMEM8BA6NDV4 472 aa9.96□□□□□ -0.82
TMEM39A-210ENST00000490099 C1QTNF9BB2RNN3 333 aa9.96□□□□□ -0.82
TMEM39A-210ENST00000490099 H0Y8X5 98 aa9.96□□□□□ -0.82
TMEM39A-210ENST00000490099 GOLGA8SH3BPF8 625 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms