RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 VAMP7P51809 220 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 STX17P56962 302 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 ENPEPQ07075 957 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 DMWDQ09019 674 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 MYO1EQ12965 1108 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 NFATC3Q12968 1075 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 BIRC3Q13489 604 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 STX1AQ16623 288 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 CCDC40Q4G0X9 1142 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 C9orf57Q5W0N0 161 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 TMEM173Q86WV6 379 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 CEP57Q86XR8 500 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 EFCAB13Q8IY85 973 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 CSGALNACT2Q8N6G5 542 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 APPL2Q8NEU8 664 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 NECTIN4Q96NY8 510 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 SMAD5Q99717 465 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 TTPALQ9BTX7 342 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 MTMR12Q9C0I1 747 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 METTL14Q9HCE5 456 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 KCND1Q9NSA2 647 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 CACNG4Q9UBN1 327 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 FBXO10Q9UK96 956 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 TRHDEQ9UKU6 1024 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 AGAP1Q9UPQ3 857 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 USP24Q9UPU5 2620 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 TRIP11Q15643 1979 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 SPTBN2O15020 2390 aa8.55□□□□□ -1.04
TRAPPC12-221ENST00000489032 OTOGLQ3ZCN5 2332 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 TRIM49BA6NDI0 452 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 PRR5-ARHGAP8B1AHC4 643 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 H7C4K7 107 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 PIRO00625 290 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 IKBKBO14920 756 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 SYN3O14994 580 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 AKAP3O75969 853 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 CAVIN2O95810 425 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 KRT1P04264 644 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 CYP1A1P04798 512 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 ITGB3P05106 788 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 ODC1P11926 461 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 BRCC3P46736 316 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 IL13RA1P78552 427 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 BFSP1Q12934 665 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 TCERG1LQ5VWI1 586 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 LMBRD2Q68DH5 695 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 TTI2Q6NXR4 508 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 SYCE2Q6PIF2 218 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 RBM43Q6ZSC3 357 aaKnown RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 TRAPPC11Q7Z392 1133 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 CXorf67Q86X51 503 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 METTL23Q86XA0 190 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 FAM114A1Q8IWE2 563 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 GPR65Q8IYL9 337 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 LRRC52Q8N7C0 313 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 MRPL43Q8N983 215 aaKnown RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 CCDC150Q8NCX0 1101 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 PARD3BQ8TEW8 1205 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 RIN2Q8WYP3 895 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 RTKNQ9BST9 563 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 NAT10Q9H0A0 1025 aaKnown RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 ZBP1Q9H171 429 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 NCDNQ9UBB6 729 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 ARMCX3Q9UH62 379 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 FAM208BQ5VWN6 2430 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 FANCMQ8IYD8 2048 aa8.54□□□□□ -1.04
TRAPPC12-221ENST00000489032 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ANO9A1A5B4 782 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 LRRIQ3A6PVS8 624 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 F8W810 466 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 DDX3XO00571 662 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 HUS1O60921 280 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 P4HA1P13674 534 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 CCND1P24385 295 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 KLRC2P26717 231 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ATICP31939 592 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 GTF2H1P32780 548 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 LILRA4P59901 499 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ITIH3Q06033 890 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 CCDC173Q0VFZ6 552 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 CETN1Q12798 172 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 KLF1Q13351 362 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 PTPN14Q15678 1187 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 PSMD5Q16401 504 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 DPCR1Q3MIW9 517 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 DCAF17Q5H9S7 520 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 GRAMD4Q6IC98 578 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ZNF280DQ6N043 979 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 CREBRFQ8IUR6 639 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ZC3H3Q8IXZ2 948 aaKnown RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 ZDHHC14Q8IZN3 488 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 THEM5Q8N1Q8 247 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 TDRD5Q8NAT2 981 aaKnown RBP8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 OR5B17Q8NGF7 314 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 EEF2KMTQ96G04 330 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 HPDLQ96IR7 371 aa8.53□□□□□ -1.04
TRAPPC12-221ENST00000489032 IMPG2Q9BZV3 1241 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms