RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SIGLEC14Q08ET2 396 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 PTK6Q13882 451 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 ALFQ53S48 1182 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 RABGAP1LQ5R372 815 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 LRRC38Q5VT99 294 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 FBRSL1Q9HCM7 1045 aaKnown RBP19.85■□□□□ 0.77
CCM2-216ENST00000488727 FEZ2Q9UHY8 353 aaPredicted RBP19.85■□□□□ 0.77
CCM2-216ENST00000488727 FBXO10Q9UK96 956 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 CREB3O43889 395 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 PRKCQQ04759 706 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 SLMAPQ14BN4 828 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 DPYSL2Q16555 572 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 ASTLQ6HA08 431 aaPredicted RBP19.85■□□□□ 0.77
CCM2-216ENST00000488727 PHTF2Q8N3S3 785 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 HERPUD2Q9BSE4 406 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 KLHL11Q9NVR0 708 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 A0A1B0GVM2 712 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 TYW5A2RUC4 315 aaKnown RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 TCAF2A6NFQ2 919 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 KCNJ1P48048 391 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 GALK1P51570 392 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 PON2Q15165 354 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 KCTD19Q17RG1 926 aaPredicted RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 PPP6R3Q5H9R7 873 aaPredicted RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 TTC39BQ5VTQ0 682 aaPredicted RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 POLNQ7Z5Q5 900 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 CROCCP2Q86T23 111 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 HOOK3Q86VS8 718 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 C1orf54Q8WWF1 131 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 XPO6Q96QU8 1125 aaKnown RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 DNAJC17Q9NVM6 304 aaKnown RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 PPARGC1AQ9UBK2 798 aaKnown RBP19.84■□□□□ 0.77
CCM2-216ENST00000488727 ZNF212Q9UDV6 495 aa19.84■□□□□ 0.77
CCM2-216ENST00000488727 PI4K2BG5E9Z4 385 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 LUC7L3O95232 432 aaKnown RBP19.83■□□□□ 0.77
CCM2-216ENST00000488727 KRT7P08729 469 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 CISD3P0C7P0 127 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 ALADP13716 330 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 HOXC13P31276 330 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 EIF2DP41214 584 aaKnown RBP19.83■□□□□ 0.77
CCM2-216ENST00000488727 ARSEP51690 589 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 STARD6P59095 220 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 PPP1R7Q15435 360 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 CCNG2Q16589 344 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 DNAJC21Q5F1R6 531 aaKnown RBP19.83■□□□□ 0.77
CCM2-216ENST00000488727 FSCBQ5H9T9 825 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 RWDD4Q6NW29 188 aaKnown RBP19.83■□□□□ 0.77
CCM2-216ENST00000488727 TRIM67Q6ZTA4 783 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 MFN1Q8IWA4 741 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 CARNMT1Q8N4J0 409 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 FAM3CQ92520 227 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 TBC1D31Q96DN5 1066 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 MSANTD3Q96H12 275 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 RBM41Q96IZ5 413 aaKnown RBP19.83■□□□□ 0.77
CCM2-216ENST00000488727 EPAS1Q99814 870 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 P2RY13Q9BPV8 354 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 TMEM109Q9BVC6 243 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 OSBPL8Q9BZF1 889 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 ZYG11BQ9C0D3 744 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 PCDH18Q9HCL0 1135 aa19.83■□□□□ 0.77
CCM2-216ENST00000488727 GAS8O95995 478 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CD48P09326 243 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 GOT1P17174 413 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 HLA-FP30511 346 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 PTPN7P35236 360 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CDH4P55283 916 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 KDSRQ06136 332 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CALCOCO2Q13137 446 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 DENND2CQ68D51 928 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CHST9Q7L1S5 443 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 TFAP2DQ7Z6R9 452 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 SFTPA1Q8IWL2 248 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 ATL2Q8NHH9 583 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 DEC1Q9P2X7 70 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 TNFRSF10AO00220 468 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 EEF2KO00418 725 aaKnown RBP19.82■□□□□ 0.76
CCM2-216ENST00000488727 CLDN11O75508 207 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 ITIH2P19823 946 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 EPHB2P29323 1055 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CETN2P41208 172 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 DGKGP49619 791 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 ATP1A2P50993 1020 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CDH6P55285 790 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 TPI1P60174 286 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CAV1Q03135 178 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 IFFO1Q0D2I5 559 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CDH18Q13634 790 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 KRT71Q3SY84 523 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 TMEM196Q5HYL7 178 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 CXorf57Q6NSI4 855 aaKnown RBP19.82■□□□□ 0.76
CCM2-216ENST00000488727 NLRP14Q86W24 1093 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 RCOR2Q8IZ40 523 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 OR52K2Q8NGK3 314 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 FIBINQ8TAL6 211 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 EZH1Q92800 747 aaPredicted RBP19.82■□□□□ 0.76
CCM2-216ENST00000488727 RNF25Q96BH1 459 aaPredicted RBP19.82■□□□□ 0.76
CCM2-216ENST00000488727 TLCD1Q96CP7 247 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 SLC2A11Q9BYW1 496 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 NEU2Q9Y3R4 380 aa19.82■□□□□ 0.76
CCM2-216ENST00000488727 H0Y626 953 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms