RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DNAJC7Q99615 494 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 ACE2Q9BYF1 805 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 PABPC3Q9H361 631 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 SERGEFQ9UGK8 458 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 SLC25A13Q9UJS0 675 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 SCML1Q9UN30 329 aa16.34■□□□□ 0.21
CTDSP1-209ENST00000488627 LNP1A1A4G5 178 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 C10orf142B7Z368 130 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC30A4O14863 429 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 KHNYNO15037 678 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 MID1O15344 667 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 SMAD6O43541 496 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 CD160O95971 181 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 DNTTP04053 509 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 MAOBP27338 520 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC8A1P32418 973 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 DPP6P42658 865 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 MAPKAPK2P49137 400 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 LIMK1P53667 647 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 AIF1P55008 147 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 ASTE1Q2TB18 679 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 AASDHQ4L235 1098 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC23A3Q6PIS1 610 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 USP30Q70CQ3 517 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 ARHGEF2Q92974 986 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 NEUROG2Q9H2A3 272 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-209ENST00000488627 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 CDX4O14627 284 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 TM4SF5O14894 197 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 MCF2LO15068 1137 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 RNASEH1O60930 286 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ZNF821O75541 412 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 SDHBP21912 280 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ACVRL1P37023 503 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 METAP1P53582 386 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ARF5P84085 180 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 CA9Q16790 459 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 TRIM61Q5EBN2 209 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ALKBH5Q6P6C2 394 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 Q6ZVU0 165 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 VPS36Q86VN1 386 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 AADATQ8N5Z0 425 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 ATP11CQ8NB49 1132 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 OR8K1Q8NGG5 319 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 C1orf216Q8TAB5 229 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 FAM131CQ96AQ9 280 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 SPON2Q9BUD6 331 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 BTBD1Q9H0C5 482 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 THAP2Q9H0W7 228 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 PCED1AQ9H1Q7 454 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 C6orf106Q9H6K1 298 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 CAPN10Q9HC96 672 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 FBXL12Q9NXK8 326 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 DNAI1Q9UI46 699 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 CDV3Q9UKY7 258 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 SARDHQ9UL12 918 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 PPM1HQ9ULR3 514 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 PLXND1Q9Y4D7 1925 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
CTDSP1-209ENST00000488627 THADAQ6YHU6 1953 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 CBX4O00257 560 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 LRCH4O75427 683 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 CYP1A2P05177 515 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 C5AR1P21730 350 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 EPHB2P29323 1055 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 MIPP30301 263 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 DRD3P35462 400 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 CLCN6P51797 869 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 SLC20A2Q08357 652 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 TRIM14Q14142 442 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 SYCP2LQ5T4T6 812 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 STPG1Q5TH74 334 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 DCAF12L1Q5VU92 463 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 RTL3Q8N8U3 475 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 OR2A12Q8NGT7 310 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 RTKNQ9BST9 563 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 ACTL7AQ9Y615 435 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 DNAH14Q0VDD8 3507 aa16.31■□□□□ 0.2
CTDSP1-209ENST00000488627 CXorf51AA0A1B0GTR3 108 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 A0A1W2PP55 124 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 CREB3O43889 395 aa16.3■□□□□ 0.2
CTDSP1-209ENST00000488627 SEMA4FO95754 770 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms