RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 STIM1Q13586 685 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 THOC5Q13769 683 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 AP5B1Q2VPB7 878 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 EARS2Q5JPH6 523 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 WDR45BQ5MNZ6 344 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 UBAP2Q5T6F2 1119 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 LIPMQ5VYY2 423 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 JAKMIP3Q5VZ66 844 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 CCDC70Q6NSX1 233 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 RTL10Q7L3V2 364 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 PIP4P1Q86T03 277 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 TMEM217Q8N7C4 229 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 ENDOVQ8N8Q3 282 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 IL17REQ8NFR9 667 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 KAT2BQ92831 832 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 RNFT2Q96EX2 444 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 STN1Q9H668 368 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 MOV10Q9HCE1 1003 aaKnown RBP3.56□□□□□ -1.84
CD46-215ENST00000488596 TXNRD2Q9NNW7 524 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 SLC22A11Q9NSA0 550 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 WWOXQ9NZC7 414 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 PI4KBQ9UBF8 816 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 GJD2Q9UKL4 321 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 HSF4Q9ULV5 492 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 DTX4Q9Y2E6 619 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 PKP3Q9Y446 797 aa3.56□□□□□ -1.84
CD46-215ENST00000488596 A0A1B0GVC2 190 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 CXorf65A6NEN9 183 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 A6NLC8 198 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 SH3BP5O60239 455 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 UGDHO60701 494 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 NFATC1O95644 943 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 WEE2P0C1S8 567 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 CYP19A1P11511 503 aaPredicted RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 CYP4B1P13584 511 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 ATP1A3P13637 1013 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 XBP1P17861 261 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 SCP2P22307 547 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 PGM1P36871 562 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 THBS3P49746 956 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 RPS6KA3P51812 740 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 GHRHRQ02643 423 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 POU5F1BQ06416 359 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 C10orf76Q5T2E6 689 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 SLC9C2Q5TAH2 1124 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 NAPEPLDQ6IQ20 393 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 ANO7Q6IWH7 933 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 DENND1BQ6P3S1 775 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 ADGRF4Q8IZF3 695 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 PAQR4Q8N4S7 273 aaPredicted RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 USP38Q8NB14 1042 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 KAT2AQ92830 837 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 RRP36Q96EU6 259 aaKnown RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 NAP1L4Q99733 375 aaKnown RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 PHF7Q9BWX1 381 aaPredicted RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 WASH6PQ9NQA3 447 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 TMEM248Q9NWD8 314 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 PGAP2Q9UHJ9 254 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 IPO11Q9UI26 975 aaKnown RBP3.55□□□□□ -1.84
CD46-215ENST00000488596 TNFSF13BQ9Y275 285 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 GDAQ9Y2T3 454 aa3.55□□□□□ -1.84
CD46-215ENST00000488596 C2CD4BA6NLJ0 364 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 C17orf100A8MU93 164 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 TSPAN3O60637 253 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 OAZ2O95190 189 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 SGPL1O95470 568 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 CD63P08962 238 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 HNRNPA1P09651 372 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD46-215ENST00000488596 PRKCHP24723 683 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 TYK2P29597 1187 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 LIFRP42702 1097 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 CPA2P48052 419 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 HTR6P50406 440 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 NR1H2P55055 460 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.54□□□□□ -1.84
CD46-215ENST00000488596 BYSLQ13895 437 aaKnown RBP3.54□□□□□ -1.84
CD46-215ENST00000488596 SEMA3AQ14563 771 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 PGM5Q15124 567 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 NFIL3Q16649 462 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 GXYLT1Q4G148 440 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 FBXO43Q4G163 708 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 C9orf47Q6ZRZ4 202 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 SMRP1Q8NCR6 262 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 OR52N4Q8NGI2 321 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 ZFPM2Q8WW38 1151 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 IGFBPL1Q8WX77 278 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 CUL5Q93034 780 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 SEC62Q99442 399 aaKnown RBP3.54□□□□□ -1.84
CD46-215ENST00000488596 CLSTN3Q9BQT9 956 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 FRMD8Q9BZ67 464 aaPredicted RBP3.54□□□□□ -1.84
CD46-215ENST00000488596 TAOK3Q9H2K8 898 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 MROH8Q9H579 483 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 Q9N2J8 555 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 TMEM184CQ9NVA4 438 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 HDAC6Q9UBN7 1215 aa3.54□□□□□ -1.84
CD46-215ENST00000488596 CD207Q9UJ71 328 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms