RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CD53P19397 219 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 PRKCHP24723 683 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 DDIT3P35638 169 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 PLCD1P51178 756 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 MVDP53602 400 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 SSBP2P81877 361 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TLE2Q04725 743 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 GAD2Q05329 585 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 CHRNDQ07001 517 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TBX2Q13207 712 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TRPC3Q13507 836 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 KLF9Q13886 244 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 IL13RA2Q14627 380 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 ETFDHQ16134 617 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 C5orf22Q49AR2 442 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TTC39AQ5SRH9 613 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 C10orf25Q5T742 122 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 IGFN1Q86VF2 1251 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 SCAIQ8N9R8 606 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TEX19Q8NA77 164 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 SLC44A5Q8NCS7 719 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 NAXEQ8NCW5 288 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 IL17REQ8NFR9 667 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 PIGOQ8TEQ8 1089 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 EME1Q96AY2 570 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 CLMNQ96JQ2 1002 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 ZNF304Q9HCX3 659 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 Q9N2J8 555 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 ALKBH4Q9NXW9 302 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TERF2IPQ9NYB0 399 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 BCCIPQ9P287 314 aaKnown RBP eCLIP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 UPB1Q9UBR1 384 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 AGO2Q9UKV8 859 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 DHDHQ9UQ10 334 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 BTBD3Q9Y2F9 522 aa4.2□□□□□ -1.74
ECHDC1-217ENST00000488087 TRBV5-3A0A0A0MS03 114 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 A0A1B0GVC2 190 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 FOXO6A8MYZ6 492 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 CCER2I3L3R5 266 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 DHX16O60231 1041 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 WDHD1O75717 1129 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 NEURL1O76050 574 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 CBX6O95503 412 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 WNT1P04628 370 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 LCKP06239 509 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 PGM1P36871 562 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 SKIV2L2P42285 1042 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 VAMP2P63027 116 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 TBL3Q12788 808 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 MTX1Q13505 466 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 RABEP1Q15276 862 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 RBMS2Q15434 407 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 SMTNL2Q2TAL5 461 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 C6orf10Q5SRN2 563 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 JAKMIP3Q5VZ66 844 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 TMEM268Q5VZI3 342 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 TTLL5Q6EMB2 1281 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 HMBOX1Q6NT76 420 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 AADACL2Q6P093 401 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 CLEC4GQ6UXB4 293 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 BBS12Q6ZW61 710 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 DPP10Q8N608 796 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 C16orf52Q8NHV5 167 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 WIPF2Q8TF74 440 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 IGFBPL1Q8WX77 278 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 CENPIQ92674 756 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 COQ8BQ96D53 544 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 FRMD8Q9BZ67 464 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 GPR63Q9BZJ6 419 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 SPRTNQ9H040 489 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 MROH8Q9H579 483 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 ACTR5Q9H9F9 607 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 GGA3Q9NZ52 723 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 MSRB1Q9NZV6 116 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 CD207Q9UJ71 328 aa4.19□□□□□ -1.74
ECHDC1-217ENST00000488087 HMGB1P1B2RPK0 211 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 TOP3BO95985 862 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 AGR2O95994 175 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 IFIT1P09914 478 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 CDK4P11802 303 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 GJC1P36383 396 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 CCR5P51681 352 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 FOXD4Q12950 439 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 SEMA3AQ14563 771 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 PLK5Q496M5 336 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 WDR45BQ5MNZ6 344 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 ENTPD8Q5MY95 495 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 SH2D4BQ5SQS7 431 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 INTS11Q5TA45 600 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 ZKSCAN2Q63HK3 967 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 AAGABQ6PD74 315 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 LVRNQ6Q4G3 990 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 MRPL10Q7Z7H8 261 aaKnown RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 GHDCQ8N2G8 530 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 CMASQ8NFW8 434 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
ECHDC1-217ENST00000488087 PPM1MQ96MI6 270 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms