RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 TOR4AQ9NXH8 423 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 VPS51Q9UID3 782 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 VPS28Q9UK41 221 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 BTBD3Q9Y2F9 522 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ANKRD6Q9Y2G4 727 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PCDHGB2Q9Y5G2 931 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FAM208BQ5VWN6 2430 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 E9PAM4 449 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 H0Y8X5 98 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RNF103O00237 685 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 WNT9AO14904 365 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FLRT2O43155 660 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 LATO43561 262 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SNAP91O60641 907 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RTN2O75298 545 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GJB6O95452 261 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MT-CO1P00395 513 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 IL1BP01584 269 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 WNT1P04628 370 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CTSLP07711 333 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF18P17022 549 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GOT1P17174 413 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RDXP35241 583 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 OXCT1P55809 520 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GSCP56915 257 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RACK1P63244 317 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MYL5Q02045 173 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF177Q13360 481 aaPredicted RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SYCP1Q15431 976 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 TRIP6Q15654 476 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 STX1AQ16623 288 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF423Q2M1K9 1284 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MANEALQ5VSG8 457 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DCAF4L2Q8NA75 395 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 JOSD2Q8TAC2 188 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GANCQ8TET4 914 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 OMDQ99983 421 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C11orf70Q9BRQ4 267 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 WDCPQ9H6R7 721 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MPP6Q9NZW5 540 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 LIMA1Q9UHB6 759 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SLC25A13Q9UJS0 675 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 NCKAP1Q9Y2A7 1128 aa11.51□□□□□ -0.57
RAB11FIP3-210ENST00000487899 A0A0D9SEW6 157 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 A0A1W2PR77 199 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 LRRC72A6NJI9 287 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DRGXA6NNA5 263 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 K7ERQ8 282 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 VILLO15195 856 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ALOX15BO15296 676 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PLRG1O43660 514 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DKK1O94907 266 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ENDOD1O94919 500 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 F9P00740 461 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RHOCP08134 193 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 UNGP13051 313 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GLDCP23378 1020 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CCT8P50990 548 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CCR5P51681 352 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 TAS2R38P59533 333 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CNTN1Q12860 1018 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 HNRNPDQ14103 355 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 TEAD4Q15561 434 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DLG2Q15700 870 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 POM121L1PQ3SYA9 428 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C22orf39Q6P5X5 142 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SND1Q7KZF4 910 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SETD3Q86TU7 594 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MSANTD4Q8NCY6 345 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SLC30A5Q8TAD4 765 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ADAMTS14Q8WXS8 1223 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 OR8D1Q8WZ84 308 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C2orf49Q9BVC5 232 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MUC3BQ9H195 1237 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ARHGAP20Q9P2F6 1191 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PPM1HQ9ULR3 514 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MSRB2Q9Y3D2 182 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DAAM1Q9Y4D1 1078 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PAXBP1Q9Y5B6 917 aa11.5□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SHROOM3Q8TF72 1996 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FAM221BA6H8Z2 402 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C2CD4BA6NLJ0 364 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 KCNK3O14649 394 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MCF2LO15068 1137 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SLC7A4O43246 635 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SMAD6O43541 496 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PCDHGA12O60330 932 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF821O75541 412 aaPredicted RBP11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZMPSTE24O75844 475 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 TRIM16O95361 564 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ATP1A3P13637 1013 aa11.49□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RRM1P23921 792 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms