RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 CCDC114Q96M63 670 aa24.21■■□□□ 1.47
PLOD3-215ENST00000487563 PCMTD1Q96MG8 357 aaPredicted RBP24.21■■□□□ 1.47
PLOD3-215ENST00000487563 CFAP57Q96MR6 1250 aa24.21■■□□□ 1.47
PLOD3-215ENST00000487563 NLRC4Q9NPP4 1024 aa24.21■■□□□ 1.47
PLOD3-215ENST00000487563 METTL5Q9NRN9 209 aaKnown RBP24.21■■□□□ 1.47
PLOD3-215ENST00000487563 ZMIZ1Q9ULJ6 1067 aa24.21■■□□□ 1.47
PLOD3-215ENST00000487563 FARP1Q9Y4F1 1045 aaPredicted RBP24.21■■□□□ 1.47
PLOD3-215ENST00000487563 TMEM131Q92545 1883 aa24.21■■□□□ 1.47
PLOD3-215ENST00000487563 GOLGA6L22H0YM25 854 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 PLK4O00444 970 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 DFNA5O60443 496 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 GRK6P43250 576 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 IL9RQ01113 521 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 POM121L1PQ3SYA9 428 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 SLC45A4Q5BKX6 768 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 KCNT1Q5JUK3 1230 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 C6orf118Q5T5N4 469 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 SETD3Q86TU7 594 aaPredicted RBP24.2■■□□□ 1.46
PLOD3-215ENST00000487563 KDF1Q8NAX2 398 aaPredicted RBP24.2■■□□□ 1.46
PLOD3-215ENST00000487563 ZCCHC14Q8WYQ9 949 aaKnown RBP24.2■■□□□ 1.46
PLOD3-215ENST00000487563 SERAC1Q96JX3 654 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 C1orf74Q96LT6 269 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 TMPRSS4Q9NRS4 437 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 MPP6Q9NZW5 540 aa24.2■■□□□ 1.46
PLOD3-215ENST00000487563 NOCTQ9UK39 431 aaKnown RBP24.2■■□□□ 1.46
PLOD3-215ENST00000487563 E9PAM4 449 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 I6L893 689 aaPredicted RBP24.19■■□□□ 1.46
PLOD3-215ENST00000487563 SLC7A4O43246 635 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 SNAP91O60641 907 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 SRGAP2O75044 1071 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 RTN2O75298 545 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 CD38P28907 300 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 SOX5P35711 763 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 METAP1P53582 386 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 CDR2Q01850 454 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 DBX2Q6ZNG2 339 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 FAM131BQ86XD5 332 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 ZNF683Q8IZ20 524 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 DCAF4L2Q8NA75 395 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 PIP4K2CQ8TBX8 421 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 GPT2Q8TD30 523 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 EBF2Q9HAK2 575 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 ANO10Q9NW15 660 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 FANCLQ9NW38 375 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 VPS51Q9UID3 782 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 TMEM59LQ9UK28 342 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 SARDHQ9UL12 918 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 HS3ST2Q9Y278 367 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 BTBD3Q9Y2F9 522 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 DAAM1Q9Y4D1 1078 aa24.19■■□□□ 1.46
PLOD3-215ENST00000487563 KNL1Q8NG31 2342 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 GOLGA8CPA6NN73 597 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 DRGXA6NNA5 263 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 MCF2LO15068 1137 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PCDHGA12O60330 932 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 SRCP12931 536 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 OR1E1P30953 314 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PPP2CBP62714 309 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PPP2CAP67775 309 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 ATP11AP98196 1134 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 TRNP1Q6NT89 227 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 RBM43Q6ZSC3 357 aaKnown RBP24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PRPF39Q86UA1 669 aaKnown RBP24.18■■□□□ 1.46
PLOD3-215ENST00000487563 EMC1Q8N766 993 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 BAHD1Q8TBE0 780 aaPredicted RBP24.18■■□□□ 1.46
PLOD3-215ENST00000487563 HAPLN3Q96S86 360 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PSMB7Q99436 277 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 KDM4CQ9H3R0 1056 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PPM1HQ9ULR3 514 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 IGF2RP11717 2491 aa24.18■■□□□ 1.46
PLOD3-215ENST00000487563 PLRG1O43660 514 aaKnown RBP24.17■■□□□ 1.46
PLOD3-215ENST00000487563 STAT1P42224 750 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 COPB1P53618 953 aaKnown RBP24.17■■□□□ 1.46
PLOD3-215ENST00000487563 CNTN1Q12860 1018 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 STX1AQ16623 288 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 CDO1Q16878 200 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 TRIM72Q6ZMU5 477 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 ARCQ7LC44 396 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 SLCO6A1Q86UG4 719 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 ELF4Q99607 663 aaPredicted RBP24.17■■□□□ 1.46
PLOD3-215ENST00000487563 C11orf70Q9BRQ4 267 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 GDF3Q9NR23 364 aa24.17■■□□□ 1.46
PLOD3-215ENST00000487563 TP53BP1Q12888 1972 aaPredicted RBP24.16■■□□□ 1.46
PLOD3-215ENST00000487563 IGLV3-10A0A075B6K4 115 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 A0A0D9SEW6 157 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 A0A1B0GTQ1 180 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 EPHB6O15197 1021 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 MT-CO1P00395 513 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 WNT1P04628 370 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 CYP1A1P04798 512 aaPredicted RBP24.16■■□□□ 1.46
PLOD3-215ENST00000487563 MMP8P22894 467 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 RRM1P23921 792 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 MAT2AP31153 395 aaKnown RBP24.16■■□□□ 1.46
PLOD3-215ENST00000487563 SDC4P31431 198 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 JAM2P57087 298 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 FMO1Q01740 532 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 MYL5Q02045 173 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 SYCP1Q15431 976 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 AGBL4Q5VU57 503 aa24.16■■□□□ 1.46
PLOD3-215ENST00000487563 NAPEPLDQ6IQ20 393 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms