RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 VAV1P15498 845 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 AP1B1Q10567 949 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 IER5LQ5T953 404 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 DARS2Q6PI48 645 aaKnown RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 CCDC137Q6PK04 289 aaKnown RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 RETREG1Q9H6L5 497 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 DNAJC17Q9NVM6 304 aaKnown RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 INTS6Q9UL03 887 aaKnown RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 A0A0C4DFX4 3053 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 KIF26AQ9ULI4 1882 aaPredicted RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 CACNG3O60359 315 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 MAFKO60675 156 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 RBL1P28749 1068 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 GJA4P35212 333 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 GDF10P55107 478 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 SERINC3Q13530 473 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 PDK1Q15118 436 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 PARP15Q460N3 678 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 IL31Q6EBC2 164 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 ETFBKMTQ8IXQ9 262 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 CPA6Q8N4T0 437 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 NKD2Q969F2 451 aaPredicted RBP17.26■□□□□ 0.35
NF1-211ENST00000487476 MAGEH1Q9H213 219 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 DONSONQ9NYP3 566 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 AMACRQ9UHK6 382 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 FBXO10Q9UK96 956 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 ZNF148Q9UQR1 794 aa17.26■□□□□ 0.35
NF1-211ENST00000487476 SNAP91O60641 907 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 TULP3O75386 442 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 CISD3P0C7P0 127 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 YBEYP58557 167 aaPredicted RBP17.25■□□□□ 0.35
NF1-211ENST00000487476 ZP2Q05996 745 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 ITPRIPL2Q3MIP1 535 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 SFTPA1Q8IWL2 248 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 ATPAF2Q8N5M1 289 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 GLIS1Q8NBF1 620 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 TFB1MQ8WVM0 346 aaKnown RBP17.25■□□□□ 0.35
NF1-211ENST00000487476 QKIQ96PU8 341 aaKnown RBP eCLIP17.25■□□□□ 0.352e-7■■■■■ 83.2
NF1-211ENST00000487476 USP29Q9HBJ7 922 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 IGSF9Q9P2J2 1179 aa17.25■□□□□ 0.35
NF1-211ENST00000487476 IPO11Q9UI26 975 aaKnown RBP17.25■□□□□ 0.35
NF1-211ENST00000487476 ARHGAP42A6NI28 874 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 KCNK1O00180 336 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 ETS1P14921 441 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 PRKD1Q15139 912 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 SLC45A4Q5BKX6 768 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 BZW1Q7L1Q6 419 aaKnown RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 CCDC117Q8IWD4 279 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 ADHFE1Q8IWW8 467 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 ACE2Q9BYF1 805 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 CEP41Q9BYV8 373 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 ATP13A1Q9HD20 1204 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 HOMER3Q9NSC5 361 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 KIAA1522Q9P206 1035 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 GGA2Q9UJY4 613 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 VPS28Q9UK41 221 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 RAD54BQ9Y620 910 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 CCDC188H7C350 402 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 CBX4O00257 560 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 MX2P20592 715 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 PPIDQ08752 370 aaKnown RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 NR1H3Q13133 447 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 XRCC4Q13426 336 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 GEN1Q17RS7 908 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 FUT11Q495W5 492 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 TMEM215Q68D42 235 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 LINGO4Q6UY18 593 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 CCDC105Q8IYK2 499 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 NXPE3Q969Y0 559 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 HDAC11Q96DB2 347 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 ZNF419Q96HQ0 510 aaPredicted RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 CCDC114Q96M63 670 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 XPO6Q96QU8 1125 aaKnown RBP17.24■□□□□ 0.35
NF1-211ENST00000487476 HINFPQ9BQA5 517 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 SEPT10Q9P0V9 454 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 MYO10Q9HD67 2058 aa17.24■□□□□ 0.35
NF1-211ENST00000487476 PPP1R12AO14974 1030 aaPredicted RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 NCAM2O15394 837 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 CHRNA3P32297 505 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 ACTN2P35609 894 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 OPRD1P41143 372 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 DGKGP49619 791 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 PLEKHG6Q3KR16 790 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 HSP90B2PQ58FF3 399 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 FRMD8P1Q9BZ68 369 aaPredicted RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 FBRSL1Q9HCM7 1045 aaKnown RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 BCLAF3A2AJT9 711 aaKnown RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 ANTXRLA6NF34 631 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 KCNN4O15554 427 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 PEX11BO96011 259 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 ITGAVP06756 1048 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 ZSCAN5DPP0CG00 497 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 PABPC1P11940 636 aaKnown RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 CTSOP43234 321 aaPredicted RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 KDSRQ06136 332 aa17.23■□□□□ 0.35
NF1-211ENST00000487476 TRIP13Q15645 432 aaPredicted RBP17.23■□□□□ 0.35
NF1-211ENST00000487476 PITRM1Q5JRX3 1037 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms