RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 OR8D1Q8WZ84 308 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 KLHDC7BQ96G42 594 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 PRR11Q96HE9 360 aaPredicted RBP15.8■□□□□ 0.12
MCF2L-228ENST00000487354 APOLD1Q96LR9 279 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.8■□□□□ 0.12
MCF2L-228ENST00000487354 POLR1BQ9H9Y6 1135 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 PREBQ9HCU5 417 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 OR51B4Q9Y5P0 310 aa15.8■□□□□ 0.12
MCF2L-228ENST00000487354 DOCK4Q8N1I0 1966 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 SCN8AQ9UQD0 1980 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 B8ZZF3 427 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 RNGTTO60942 597 aaKnown RBP15.79■□□□□ 0.12
MCF2L-228ENST00000487354 GP1BAP07359 652 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 C6P13671 934 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 GPD2P43304 727 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 CENPCQ03188 943 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 SLC12A1Q13621 1099 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 IGF2-ASQ6U949 168 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 KLK6Q92876 244 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 BTN2A3PQ96KV6 586 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 DEPDC7Q96QD5 511 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 TJP2Q9UDY2 1190 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 PCDHB4Q9Y5E5 795 aa15.79■□□□□ 0.12
MCF2L-228ENST00000487354 COL12A1Q99715 3063 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 A0A1W2PQU0 124 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 TCAF2A6NFQ2 919 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 KCNU1A8MYU2 1149 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 MCF2LO15068 1137 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 CASC3O15234 703 aaKnown RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 ALOX15BO15296 676 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 SLC31A1O15431 190 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 KLK10O43240 276 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 TRUB2O95900 331 aaKnown RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 APOEP02649 317 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 PRCPP42785 496 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 SULT2A1Q06520 285 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 VAC14Q08AM6 782 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 STILQ15468 1287 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 BROXQ5VW32 411 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 ABI3BPQ7Z7G0 1075 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 CCDC117Q8IWD4 279 aaPredicted RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 LSMEM2Q8N112 164 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 SNX21Q969T3 373 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 ARRDC3Q96B67 414 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 FAM149B1Q96BN6 582 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 CLMPQ9H6B4 373 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 NLGN3Q9NZ94 848 aa15.78■□□□□ 0.12
MCF2L-228ENST00000487354 ZFR2Q9UPR6 939 aaKnown RBP15.78■□□□□ 0.12
MCF2L-228ENST00000487354 F5H5T6 163 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 K7ESM1 405 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 NEBLO76041 1014 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 TGM2P21980 687 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 FMO5P49326 533 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 CLDN2P57739 230 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 TAF5Q15542 800 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 DLG2Q15700 870 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 ISXQ2M1V0 245 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 COBLL1Q53SF7 1204 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 FAM46CQ5VWP2 391 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 KIAA1614Q5VZ46 1190 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 ANKRD40Q6AI12 368 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 FBXL22Q6P050 247 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 DENND1BQ6P3S1 775 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 DSG4Q86SJ6 1040 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 ARHGEF19Q8IW93 802 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 SH2D3CQ8N5H7 860 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 ERCC4Q92889 916 aaPredicted RBP15.77■□□□□ 0.12
MCF2L-228ENST00000487354 FEM1AQ9BSK4 669 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 SLC4A5Q9BY07 1137 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 DPH1Q9BZG8 443 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 SATB2Q9UPW6 733 aa15.77■□□□□ 0.12
MCF2L-228ENST00000487354 C1QTNF3-AMACRE9PGA6 284 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 K7ENP7 123 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 SCAMP1O15126 338 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 PMM2O15305 246 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 MT-CO1P00395 513 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 NNMTP40261 264 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 PDX1P52945 283 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 FGL2Q14314 439 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 TMEM259Q4ZIN3 620 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 ZNF542PQ5EBM4 170 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 TPRG1LQ5T0D9 272 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 SEL1L3Q68CR1 1132 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 INO80CQ6PI98 192 aaPredicted RBP15.76■□□□□ 0.11
MCF2L-228ENST00000487354 HORMAD1Q86X24 394 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 IFI44Q8TCB0 444 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 KREMEN1Q96MU8 473 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 NT5C1BQ96P26 610 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 PSMB7Q99436 277 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 CALN1Q9BXU9 219 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 KLF15Q9UIH9 416 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 CNTN6Q9UQ52 1028 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 ZDHHC9Q9Y397 364 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 ENTPD2Q9Y5L3 495 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 LRP4O75096 1905 aa15.76■□□□□ 0.11
MCF2L-228ENST00000487354 CHD5Q8TDI0 1954 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms