RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 PTPRN2Q92932 1015 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 SPON2Q9BUD6 331 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 PACSIN1Q9BY11 444 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 ARRDC1-AS1Q9H2J1 176 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 DHX35Q9H5Z1 703 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 CATSPERBQ9H7T0 1116 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 SPTLC3Q9NUV7 552 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 CTTNBP2NLQ9P2B4 639 aa18.64■□□□□ 0.57
COL1A1-207ENST00000486572 NYNRINQ9P2P1 1898 aaKnown RBP18.64■□□□□ 0.57
COL1A1-207ENST00000486572 CBX4O00257 560 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 FGF10O15520 208 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-207ENST00000486572 RAMP2O60895 175 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 TMEM253P0C7T8 217 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 SRCP12931 536 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 VAV1P15498 845 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 GLDCP23378 1020 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 OXTRP30559 389 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 MPLP40238 635 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 CLCN6P51797 869 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 CREB5Q02930 508 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 ELAVL3Q14576 367 aaKnown RBP18.63■□□□□ 0.57
COL1A1-207ENST00000486572 DLG2Q15700 870 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 CA9Q16790 459 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 TTC31Q49AM3 519 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-207ENST00000486572 ACCSLQ4AC99 568 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 DAB2IPQ5VWQ8 1189 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 IL31Q6EBC2 164 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 RETSATQ6NUM9 610 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 ATP11CQ8NB49 1132 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF564Q8TBZ8 553 aaPredicted RBP18.63■□□□□ 0.57
COL1A1-207ENST00000486572 BTBD6Q96KE9 485 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 MAGEH1Q9H213 219 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 PARD6AQ9NPB6 346 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 UVRAGQ9P2Y5 699 aa18.63■□□□□ 0.57
COL1A1-207ENST00000486572 BCLAF3A2AJT9 711 aaKnown RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 WASH4PA8MWX3 477 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 MYO1FO00160 1098 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 NDUFS2O75306 463 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 ZMPSTE24O75844 475 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 MT-CO1P00395 513 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 TGM1P22735 817 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 PTGER3P43115 390 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 CST6Q15828 149 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 LYSMD4Q5XG99 296 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 LINGO4Q6UY18 593 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 ARMCX6Q7L4S7 300 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 CYP2U1Q7Z449 544 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 KIAA2013Q8IYS2 634 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 STK40Q8N2I9 435 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 ARHGEF2Q92974 986 aaKnown RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 KCTD15Q96SI1 283 aaPredicted RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 ACE2Q9BYF1 805 aaPredicted RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 SEMA4GQ9NTN9 838 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 WSB2Q9NYS7 404 aaPredicted RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 SCML1Q9UN30 329 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 THADAQ6YHU6 1953 aa18.62■□□□□ 0.57
COL1A1-207ENST00000486572 PTPRZ1P23471 2315 aaPredicted RBP18.62■□□□□ 0.57
COL1A1-207ENST00000486572 ABCA7Q8IZY2 2146 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 CXorf51AA0A1B0GTR3 108 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 TCF4P15884 667 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 ACVRL1P37023 503 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 ZNF135P52742 658 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 ARF5P84085 180 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 POLD3Q15054 466 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 CSRP2Q16527 193 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 PPP6R3Q5H9R7 873 aaPredicted RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 Q6ZVU0 165 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 DSG4Q86SJ6 1040 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 MMAAQ8IVH4 418 aaKnown RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 OR8D1Q8WZ84 308 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 FAM129BQ96TA1 746 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 PABPC3Q9H361 631 aaKnown RBP18.61■□□□□ 0.57
COL1A1-207ENST00000486572 DONSONQ9NYP3 566 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 LCMT1Q9UIC8 334 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 HPCAL4Q9UM19 191 aa18.61■□□□□ 0.57
COL1A1-207ENST00000486572 K7ERQ8 282 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 ALOX15BO15296 676 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 ADH1BP00325 375 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 IL1R2P27930 398 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 PSMD8P48556 350 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 SERPINH1P50454 418 aaKnown RBP18.6■□□□□ 0.57
COL1A1-207ENST00000486572 GEMIN4P57678 1058 aaKnown RBP18.6■□□□□ 0.57
COL1A1-207ENST00000486572 SLC20A2Q08357 652 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 SFSWAPQ12872 951 aaKnown RBP18.6■□□□□ 0.57
COL1A1-207ENST00000486572 CCDC6Q16204 474 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 SMTNL2Q2TAL5 461 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 BOLA3Q53S33 107 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 PLA2G2CQ5R387 149 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 C22orf39Q6P5X5 142 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 RFX8Q6ZV50 586 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 USP30Q70CQ3 517 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 FAM124AQ86V42 546 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 UMODL1-AS1Q8N2C9 162 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 DEFB119Q8N690 84 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 FOXJ1Q92949 421 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 CCDC114Q96M63 670 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 HSPA12BQ96MM6 686 aa18.6■□□□□ 0.57
COL1A1-207ENST00000486572 NOL6Q9H6R4 1146 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms