RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 RETSATQ6NUM9 610 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 GVINP1Q7Z2Y8 2422 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 RTL3Q8N8U3 475 aaKnown RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 ATP11CQ8NB49 1132 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 OR7D4Q8NG98 312 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 ZNF564Q8TBZ8 553 aaPredicted RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 PEBP4Q96S96 227 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 PSMB7Q99436 277 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 SNRNP25Q9BV90 132 aaKnown RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 PACSIN1Q9BY11 444 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 RSPH9Q9H1X1 276 aaPredicted RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 MAGEH1Q9H213 219 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 MTG2Q9H4K7 406 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 ATP13A1Q9HD20 1204 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 GPATCH2LQ9NWQ4 482 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 DNAI1Q9UI46 699 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 MBD1Q9UIS9 605 aaPredicted RBP12.75□□□□□ -0.37
HMG20B-211ENST00000486028 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 CYP8B1Q9UNU6 501 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 NEU3Q9UQ49 428 aa12.75□□□□□ -0.37
HMG20B-211ENST00000486028 MYO15AQ9UKN7 3530 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 ZNF292O60281 2723 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 WASH4PA8MWX3 477 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 DAPK3O43293 454 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 SNAP91O60641 907 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 RAMP2O60895 175 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 NDUFS2O75306 463 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 DNTTP04053 509 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 C7P10643 843 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 SSR1P43307 286 aaKnown RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 TPMTP51580 245 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 CLCN6P51797 869 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 RPS14P62263 151 aaKnown RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 SFSWAPQ12872 951 aaKnown RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 POLD3Q15054 466 aaPredicted RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 DLG2Q15700 870 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 PMS2CLQ68D20 193 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 CCDC170Q8IYT3 715 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 SH2D3CQ8N5H7 860 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 FRS2Q8WU20 508 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 BTBD6Q96KE9 485 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 ACE2Q9BYF1 805 aaPredicted RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 USP36Q9P275 1121 aaKnown RBP12.74□□□□□ -0.37
HMG20B-211ENST00000486028 INTUQ9ULD6 942 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 HS3ST2Q9Y278 367 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 PCDHGA5Q9Y5G8 931 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
HMG20B-211ENST00000486028 SPAG17Q6Q759 2223 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CXorf51AA0A1B0GTR3 108 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 EEF2KO00418 725 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 LRP3O75074 770 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 EPN2O95208 641 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 MT-CO1P00395 513 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 IGLV3-19P01714 112 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CD6P30203 668 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 ACVRL1P37023 503 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 HCAR3P49019 387 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 DHPSP49366 369 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 GEMIN4P57678 1058 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 YBEYP58557 167 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 RPL6Q02878 288 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 ELAVL3Q14576 367 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CA9Q16790 459 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 PPP6R3Q5H9R7 873 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 LINGO4Q6UY18 593 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CYP4V2Q6ZWL3 525 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 DSG4Q86SJ6 1040 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 TMEFF1Q8IYR6 380 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 STK40Q8N2I9 435 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 GANCQ8TET4 914 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 OR8D1Q8WZ84 308 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 PTPRN2Q92932 1015 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 ARHGEF2Q92974 986 aaKnown RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CCDC114Q96M63 670 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
HMG20B-211ENST00000486028 FAM129BQ96TA1 746 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 ZWILCHQ9H900 591 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 NDFIP2Q9NV92 336 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 SCML1Q9UN30 329 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 NCKAP1Q9Y2A7 1128 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 DMDP11532 3685 aa12.73□□□□□ -0.37
HMG20B-211ENST00000486028 CKAP5Q14008 2032 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 USP34Q70CQ2 3546 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 DOCK4Q8N1I0 1966 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 H3BRJ5 948 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 KDELR3O43731 214 aa12.72□□□□□ -0.37
HMG20B-211ENST00000486028 RRP9O43818 475 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms