RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
PTCD1-205ENST00000485746 RETREG1Q9H6L5 497 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 CATSPERBQ9H7T0 1116 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 GPATCH2LQ9NWQ4 482 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 VPS51Q9UID3 782 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 OR51B4Q9Y5P0 310 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 A0A087X0T9 212 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 A0A1W2PP55 124 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 AKR1B10O60218 316 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 GDF9O60383 454 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 RAMP2O60895 175 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 RNASEH2AO75792 299 aaKnown RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ADH1BP00325 375 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 FAM228BP0C875 321 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 VAV1P15498 845 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SSR1P43307 286 aaKnown RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ATXN3P54252 364 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 TPI1P60174 286 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SLC20A2Q08357 652 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SCAPQ12770 1279 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ELAVL3Q14576 367 aaKnown RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 PUM1Q14671 1186 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 POLD3Q15054 466 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ERMARDQ5T6L9 678 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 FAM46CQ5VWP2 391 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 LINGO4Q6UY18 593 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 Q6ZVU0 165 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SLC41A1Q8IVJ1 513 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 HDDC3Q8N4P3 179 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SH2D3CQ8N5H7 860 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 CADM4Q8NFZ8 388 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 RMDN1Q96DB5 314 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ZNF419Q96HQ0 510 aaPredicted RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 EDEM2Q9BV94 578 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 NUP85Q9BW27 656 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 THAP2Q9H0W7 228 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 DHX35Q9H5Z1 703 aaKnown RBP12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SGK2Q9HBY8 427 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 TMEM248Q9NWD8 314 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 DONSONQ9NYP3 566 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 ARHGAP20Q9P2F6 1191 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 SUSD2Q9UGT4 822 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 AP4E1Q9UPM8 1137 aa12.81□□□□□ -0.36
PTCD1-205ENST00000485746 PATE3B3GLJ2 98 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 AKR1B15C9JRZ8 316 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 C1QTNF3-AMACRE9PGA6 284 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 EEF2KO00418 725 aaKnown RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 FSBPO95073 299 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 SEMA4FO95754 770 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 MT-CO1P00395 513 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 SRCP12931 536 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 C5AR1P21730 350 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 KCNA4P22459 653 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 GLDCP23378 1020 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 MAOBP27338 520 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 ACSL1P33121 698 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 ACVRL1P37023 503 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 VASPP50552 380 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 CLCN6P51797 869 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 ADKP55263 362 aaKnown RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 IRX4P78413 519 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 GFPT1Q06210 699 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 MANEALQ5VSG8 457 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 USP30Q70CQ3 517 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 RYBPQ8N488 228 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-205ENST00000485746 OR14C36Q8NHC7 312 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 FNIP1Q8TF40 1166 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 FAM129BQ96TA1 746 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 TRIM7Q9C029 511 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 MAGEH1Q9H213 219 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 NEUROG2Q9H2A3 272 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 DYRK4Q9NR20 520 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 TMEM74BQ9NUR3 256 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 CTTNBP2NLQ9P2B4 639 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 IP6K2Q9UHH9 426 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 PILRBQ9UKJ0 227 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 SLC6A14Q9UN76 642 aa12.8□□□□□ -0.36
PTCD1-205ENST00000485746 LRRC72A6NJI9 287 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 METTL12A8MUP2 240 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 K7ERQ8 282 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 MYO1FO00160 1098 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 BUB1O43683 1085 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 IGLV3-19P01714 112 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 GOT1P17174 413 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 MIPP30301 263 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 HTR7P34969 479 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 HOXD12P35452 270 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 GALCP54803 685 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 GEMIN4P57678 1058 aaKnown RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 PIGHQ14442 188 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 ACAP1Q15027 740 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 POM121L1PQ3SYA9 428 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 DGLUCYQ7Z3D6 616 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 NLRP14Q86W24 1093 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 CNGA4Q8IV77 575 aa12.79□□□□□ -0.36
PTCD1-205ENST00000485746 RTL3Q8N8U3 475 aaKnown RBP12.79□□□□□ -0.36
PTCD1-205ENST00000485746 FRS2Q8WU20 508 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms