RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 AGBL4Q5VU57 503 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 PDZD3Q86UT5 571 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 SH2D3CQ8N5H7 860 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 MFSD2AQ8NA29 543 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 ZNF397Q8NF99 534 aaPredicted RBP19.76■□□□□ 0.75
COL27A1-205ENST00000485397 KDM4CQ9H3R0 1056 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 SYNCQ9H7C4 482 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 PIGVQ9NUD9 493 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 TBC1D30Q9Y2I9 924 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 PCDHGA1Q9Y5H4 931 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 ATRXP46100 2492 aa19.76■□□□□ 0.75
COL27A1-205ENST00000485397 FAM170AA1A519 330 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 C1QTNF3-AMACRE9PGA6 284 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 I6L893 689 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-205ENST00000485397 MCF2LO15068 1137 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 YKT6O15498 198 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 SNAP91O60641 907 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 ADCY5O95622 1261 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 MT-CO1P00395 513 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 ARRB1P49407 418 aaPredicted RBP19.75■□□□□ 0.75
COL27A1-205ENST00000485397 CDH4P55283 916 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 RNASE9P60153 205 aaKnown RBP19.75■□□□□ 0.75
COL27A1-205ENST00000485397 ALFQ53S48 1182 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 TMPRSS12Q86WS5 348 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 PDCD7Q8N8D1 485 aaKnown RBP19.75■□□□□ 0.75
COL27A1-205ENST00000485397 PSMB7Q99436 277 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 NPY6RQ99463 290 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 TKTL2Q9H0I9 626 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 MUC3BQ9H195 1237 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 CA5BQ9Y2D0 317 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 URB1O60287 2271 aaKnown RBP19.75■□□□□ 0.75
COL27A1-205ENST00000485397 FREM2Q5SZK8 3169 aa19.75■□□□□ 0.75
COL27A1-205ENST00000485397 KNTC1P50748 2209 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 ALOX15BO15296 676 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 RFPL3O75679 317 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 SRCP12931 536 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 RXRGP48443 463 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 SNX16P57768 344 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 MTA1Q13330 715 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 DPY19L2P1Q6NXN4 242 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 TRIM69Q86WT6 500 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 WDCPQ9H6R7 721 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 ERVMER34-1Q9H9K5 563 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 ARHGEF38Q9NXL2 777 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.74■□□□□ 0.751e-8■□□□□ 10.5
COL27A1-205ENST00000485397 DMTF1Q9Y222 760 aa19.74■□□□□ 0.75
COL27A1-205ENST00000485397 COL5A1P20908 1838 aaPredicted RBP19.74■□□□□ 0.75
COL27A1-205ENST00000485397 DSPP15924 2871 aaKnown RBP19.73■□□□□ 0.75
COL27A1-205ENST00000485397 K7ERQ8 282 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 CTSLP07711 333 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 RHOCP08134 193 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 JUPP14923 745 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 CXCR3P49682 368 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 ACADVLP49748 655 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 SULT1E1P49888 294 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 TAS2R38P59533 333 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 UBE2HP62256 183 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 STAT4Q14765 748 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 MAN2A1Q16706 1144 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 TPD52L1Q16890 204 aaPredicted RBP19.73■□□□□ 0.75
COL27A1-205ENST00000485397 KANSL1Q7Z3B3 1105 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 FAM71AQ8IYT1 594 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 ZNF683Q8IZ20 524 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 OXR1Q8N573 874 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 MLKLQ8NB16 471 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 TSC1Q92574 1164 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 TMPRSS4Q9NRS4 437 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 HS3ST2Q9Y278 367 aa19.73■□□□□ 0.75
COL27A1-205ENST00000485397 DOCK9Q9BZ29 2069 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 RNF103O00237 685 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 SMAD6O43541 496 aaKnown RBP19.72■□□□□ 0.75
COL27A1-205ENST00000485397 RNGTTO60942 597 aaKnown RBP19.72■□□□□ 0.75
COL27A1-205ENST00000485397 RRM1P23921 792 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 NUDT1P36639 197 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 KRT83P78385 493 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 BRMS1LQ5PSV4 323 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 PIP5KL1Q5T9C9 394 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 SFMBT2Q5VUG0 894 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 SMYD5Q6GMV2 418 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 IQCHQ86VS3 1027 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 ZDHHC17Q8IUH5 632 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 ATP11CQ8NB49 1132 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 KLK6Q92876 244 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 ARRDC3Q96B67 414 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 TBCBQ99426 244 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 MYOCQ99972 504 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 PDCL3Q9H2J4 239 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 SCUBE2Q9NQ36 999 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 RRN3Q9NYV6 651 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 MPP6Q9NZW5 540 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 VPS51Q9UID3 782 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 STAP1Q9ULZ2 295 aa19.72■□□□□ 0.75
COL27A1-205ENST00000485397 A0A0D9SEW6 157 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 DRGXA6NNA5 263 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 PRAMEF26H0Y7S4 382 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 SDC3O75056 442 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 C1SP09871 688 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 CHRNA3P32297 505 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 DEUP1Q05D60 604 aa19.71■□□□□ 0.75
COL27A1-205ENST00000485397 DRAP1Q14919 205 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms