RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 NT5DC3Q86UY8 548 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 DENND1CQ8IV53 801 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 TERB1Q8NA31 727 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 DRAXINQ8NBI3 349 aaPredicted RBP11.06□□□□□ -0.64
DDX56-212ENST00000485367 RNF139Q8WU17 664 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 KCTD13Q8WZ19 329 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 STAMBPL1Q96FJ0 436 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 ERP44Q9BS26 406 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 AP1M1Q9BXS5 423 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 CARD9Q9H257 536 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 SEMA4GQ9NTN9 838 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 PLK2Q9NYY3 685 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 AMFRQ9UKV5 643 aa11.06□□□□□ -0.64
DDX56-212ENST00000485367 CORO1CQ9ULV4 474 aaPredicted RBP11.06□□□□□ -0.64
DDX56-212ENST00000485367 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 RGS16O15492 202 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 TTI1O43156 1089 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 LRP3O75074 770 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ALDH1A2O94788 518 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 RPSAP08865 295 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 WASP42768 502 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ZNF132P52740 706 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ARHGAP8P85298 464 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 CCDC6Q16204 474 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 GALNTL6Q49A17 601 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 USP39Q53GS9 565 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 TNFAIP8L3Q5GJ75 292 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 PMF1Q6P1K2 205 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ABCA7Q8IZY2 2146 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 TEX9Q8N6V9 391 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ZNF513Q8N8E2 541 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 MDGA1Q8NFP4 955 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 SLC35F5Q8WV83 523 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 TBC1D31Q96DN5 1066 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 ARRDC1-AS1Q9H2J1 176 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 CNGB3Q9NQW8 809 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 OLA1Q9NTK5 396 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 ZDHHC18Q9NUE0 388 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 CPSF2Q9P2I0 782 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 SFMBT1Q9UHJ3 866 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 AGO1Q9UL18 857 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 DAAM1Q9Y4D1 1078 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 RPS6KL1Q9Y6S9 549 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 SNX3O60493 162 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ADAM23O75077 832 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 GABBR2O75899 941 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 CHKAP35790 457 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 DGKGP49619 791 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 DAOAP59103 153 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 PUM1Q14671 1186 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX56-212ENST00000485367 CSRP2Q16527 193 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 PLK5Q496M5 336 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ACCSLQ4AC99 568 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 CCDC38Q502W7 563 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 GJB7Q6PEY0 223 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ZNF571Q7Z3V5 609 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 TRMT11Q7Z4G4 463 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 LRRC34Q8IZ02 419 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 PGBD3Q8N328 593 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 KCNV2Q8TDN2 545 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 HMGB4Q8WW32 186 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 PLD4Q96BZ4 506 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 LOXL4Q96JB6 756 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 ZC3H10Q96K80 434 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 RUNDC3BQ96NL0 473 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 MIS12Q9H081 205 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 ABCC13Q9NSE7 274 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 MTRF1LQ9UGC7 380 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 CDV3Q9UKY7 258 aaKnown RBP11.05□□□□□ -0.64
DDX56-212ENST00000485367 THADAQ6YHU6 1953 aa11.05□□□□□ -0.64
DDX56-212ENST00000485367 CACNA1AO00555 2505 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 TCRBV21S2A2A0A5A6 115 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 SMNDC1O75940 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
DDX56-212ENST00000485367 RHOBTB1O94844 696 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 SUN1O94901 812 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 EPN2O95208 641 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 CISD3P0C7P0 127 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 UCHL3P15374 230 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 SLC9A1P19634 815 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 SDHBP21912 280 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 ATP5DP30049 168 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 GCKP35557 465 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 HARS2P49590 506 aaKnown RBP11.04□□□□□ -0.64
DDX56-212ENST00000485367 MFAP3P55082 362 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 NCALDP61601 193 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 DR1Q01658 176 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 CMPK2Q5EBM0 449 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 EGFLAMQ63HQ2 1017 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 CAPRIN2Q6IMN6 1127 aaKnown RBP11.04□□□□□ -0.64
DDX56-212ENST00000485367 SDE2Q6IQ49 451 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 DENND1BQ6P3S1 775 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 PRR23CQ6ZRP0 262 aa11.04□□□□□ -0.64
DDX56-212ENST00000485367 DGLUCYQ7Z3D6 616 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms