RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 SLC30A9Q6PML9 568 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 TMEM217Q8N7C4 229 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 OR14A16Q8NHC5 309 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 CLEC4CQ8WTT0 213 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 RSC1A1Q92681 617 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 KCNJ9Q92806 393 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 WDR77Q9BQA1 342 aaPredicted RBP4.53□□□□□ -1.68
SMC4-215ENST00000484799 MECRQ9BV79 373 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 IFT27Q9BW83 186 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMC4-215ENST00000484799 TP63Q9H3D4 680 aaPredicted RBP4.53□□□□□ -1.68
SMC4-215ENST00000484799 HIPK3Q9H422 1215 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 CD93Q9NPY3 652 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 IGSF9Q9P2J2 1179 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 CDH22Q9UJ99 828 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 ICAM5Q9UMF0 924 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 CNTN6Q9UQ52 1028 aa4.53□□□□□ -1.68
SMC4-215ENST00000484799 FFAR2O15552 330 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 RGS14O43566 566 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 TMCC1O94876 653 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 LDHAP00338 332 aaKnown RBP4.52□□□□□ -1.69
SMC4-215ENST00000484799 ITGA2BP08514 1039 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 RFC1P35251 1148 aaPredicted RBP4.52□□□□□ -1.69
SMC4-215ENST00000484799 AVPR1AP37288 418 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 TM4SF4P48230 202 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 NEK3P51956 506 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 SLC39A14Q15043 492 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 PLCB4Q15147 1175 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 BTBD16Q32M84 506 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 PLK5Q496M5 336 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 ZNF367Q7RTV3 350 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 FJX1Q86VR8 437 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 HORMAD2Q8N7B1 307 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 ZNF527Q8NB42 609 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 ENGASEQ8NFI3 743 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 SLC35F5Q8WV83 523 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 CPT1BQ92523 772 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 C18orf8Q96DM3 657 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 TMEM41AQ96HV5 264 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 PIGSQ96S52 555 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 NLRC4Q9NPP4 1024 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 PLSCR4Q9NRQ2 329 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 IL36RNQ9UBH0 155 aa4.52□□□□□ -1.69
SMC4-215ENST00000484799 IFITM10A6NMD0 228 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 SLC38A8A6NNN8 435 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 BTBD18B2RXH4 712 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 EYA2O00167 538 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 IFRD1O00458 451 aaPredicted RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 ENO3P13929 434 aaPredicted RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 HTR3AP46098 478 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 COMPP49747 757 aaPredicted RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 POU3F1Q03052 451 aaPredicted RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 C9orf50Q5SZB4 431 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 KLHL17Q6TDP4 642 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 CREB3L2Q70SY1 520 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 RAB11FIP2Q7L804 512 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 VPS52Q8N1B4 723 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 BICD2Q8TD16 824 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 DNASE2BQ8WZ79 361 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 C3orf49Q96BT1 292 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 ELAC1Q9H777 363 aaKnown RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 RMI1Q9H9A7 625 aa4.51□□□□□ -1.69
SMC4-215ENST00000484799 SRPRBQ9Y5M8 271 aaKnown RBP4.51□□□□□ -1.69
SMC4-215ENST00000484799 C17orf102A2RUQ5 167 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 GOLGA6L3A6NEY3 463 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 ITM2AO43736 263 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 MYZAPP0CAP1 466 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 SKIV2L2P42285 1042 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 CDH12P55289 794 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 SELENOVP59797 346 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 RHAGQ02094 409 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 SPARCL1Q14515 664 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 ZRSR2Q15696 482 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 TDRD12Q587J7 1177 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 NFRKBQ6P4R8 1299 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 EXD3Q8N9H8 876 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 LMO3Q8TAP4 145 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 CEP76Q8TAP6 659 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 RTP4Q96DX8 246 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 ELAC2Q9BQ52 826 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 RTKNQ9BST9 563 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 CADM1Q9BY67 442 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 HERC5Q9UII4 1024 aaKnown RBP4.5□□□□□ -1.69
SMC4-215ENST00000484799 DHDHQ9UQ10 334 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 PKP3Q9Y446 797 aa4.5□□□□□ -1.69
SMC4-215ENST00000484799 TRBV5-7A0A0A0MS05 114 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 AQP12BA6NM10 295 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 HNRNPRO43390 633 aaKnown RBP4.49□□□□□ -1.69
SMC4-215ENST00000484799 IGKV3-20P01619 116 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 LCATP04180 440 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 FCGR1AP12314 374 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 NAGAP17050 411 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 MT3P25713 68 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 PPM1AP35813 382 aa4.49□□□□□ -1.69
SMC4-215ENST00000484799 PMS2P54278 862 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms