RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SYN1P17600 705 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 NFKB1P19838 968 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 RENBPP51606 427 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 ERVFC1P60507 584 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 TNK2Q07912 1038 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 ADGRF1Q5T601 910 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 LGI2Q8N0V4 545 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 ATXN2LQ8WWM7 1075 aaKnown RBP26.79■■□□□ 1.88
SHOX2-204ENST00000483851 GORASP1Q9BQQ3 440 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 DHRS4Q9BTZ2 278 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 FAM107BQ9H098 131 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 LRRC40Q9H9A6 602 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 TLR9Q9NR96 1032 aa26.79■■□□□ 1.88
SHOX2-204ENST00000483851 LINC01553A4QN01 128 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 ANXA9O76027 345 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 GCAP28676 217 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 OR1E1P30953 314 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 CORO1AP31146 461 aaKnown RBP26.78■■□□□ 1.88
SHOX2-204ENST00000483851 CDH4P55283 916 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 TTC39BQ5VTQ0 682 aaPredicted RBP26.78■■□□□ 1.88
SHOX2-204ENST00000483851 LINC00523Q86TU6 105 aa26.78■■□□□ 1.88
SHOX2-204ENST00000483851 ARHGEF2Q92974 986 aaKnown RBP26.78■■□□□ 1.88
SHOX2-204ENST00000483851 PSMC3IPQ9P2W1 217 aaPredicted RBP26.78■■□□□ 1.88
SHOX2-204ENST00000483851 GOLGA6L7A0A1B0GV03 622 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 TCRBV9S1A1TA0A576 114 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 SPATA31D3P0C874 917 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 CHN1P15882 459 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 POLD3Q15054 466 aaPredicted RBP26.77■■□□□ 1.88
SHOX2-204ENST00000483851 CAPN12Q6ZSI9 719 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 SPATA31D4Q6ZUB0 917 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 DENND1CQ8IV53 801 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 CNPY4Q8N129 248 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 POF1BQ8WVV4 589 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 MRPS31Q92665 395 aaKnown RBP26.77■■□□□ 1.88
SHOX2-204ENST00000483851 LRRC3Q9BY71 257 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 GLOD4Q9HC38 313 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 ALG13Q9NP73 1137 aaKnown RBP26.77■■□□□ 1.88
SHOX2-204ENST00000483851 SENP1Q9P0U3 644 aa26.77■■□□□ 1.88
SHOX2-204ENST00000483851 MTCL1Q9Y4B5 1905 aaKnown RBP26.77■■□□□ 1.88
SHOX2-204ENST00000483851 LPXNO60711 386 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 KLKB1P03952 638 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 MBL2P11226 248 aaPredicted RBP26.76■■□□□ 1.88
SHOX2-204ENST00000483851 CDC25CP30307 473 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 SLC6A4P31645 630 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 GRIA1P42261 906 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 IL10RBQ08334 325 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 NAPEPLDQ6IQ20 393 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 CHST9Q7L1S5 443 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 EXOC3L1Q86VI1 746 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 NSMCE1Q8WV22 266 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 STAMBPL1Q96FJ0 436 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 HMCESQ96FZ2 354 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 MAGEH1Q9H213 219 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 CASS4Q9NQ75 786 aa26.76■■□□□ 1.88
SHOX2-204ENST00000483851 POC1B-GALNT4F8VUJ3 575 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 CLDN11O75508 207 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 PRKCHP24723 683 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 MTM1Q13496 603 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 ADGRD1Q6QNK2 874 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 TMC8Q8IU68 726 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 GSDMBQ8TAX9 411 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 ZFRQ96KR1 1074 aaKnown RBP26.76■■□□□ 1.87
SHOX2-204ENST00000483851 MLPHQ9BV36 600 aaPredicted RBP26.76■■□□□ 1.87
SHOX2-204ENST00000483851 CCDC134Q9H6E4 229 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 GKN1Q9NS71 199 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 RBM22Q9NW64 420 aaKnown RBP eCLIP26.76■■□□□ 1.87
SHOX2-204ENST00000483851 PCDHA11Q9Y5I1 949 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 DENND4CQ5VZ89 1909 aa26.76■■□□□ 1.87
SHOX2-204ENST00000483851 PEX11BO96011 259 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 PPARDQ03181 441 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 SERINC3Q13530 473 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 STEAP4Q687X5 459 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 SAMD11Q96NU1 681 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 SP110Q9HB58 689 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 CTNNAL1Q9UBT7 734 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 AGO1Q9UL18 857 aaKnown RBP26.75■■□□□ 1.87
SHOX2-204ENST00000483851 MAD1L1Q9Y6D9 718 aa26.75■■□□□ 1.87
SHOX2-204ENST00000483851 NEBLO76041 1014 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 FGF19O95750 216 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 HDCP19113 662 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 GABRR2P28476 465 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 NPY2RP49146 381 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 GEMP55040 296 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 PDE12Q6L8Q7 609 aaKnown RBP26.74■■□□□ 1.87
SHOX2-204ENST00000483851 C6orf89Q6UWU4 347 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 UNC5AQ6ZN44 842 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 TEX26Q8N6G2 289 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 CFAP36Q96G28 342 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 GCNAQ96QF7 691 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 BFARQ9NZS9 450 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 CHD5Q8TDI0 1954 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 MKI67P46013 3256 aaKnown RBP26.74■■□□□ 1.87
SHOX2-204ENST00000483851 PGAM1P18669 254 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 DRD4P21917 467 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 MSH2P43246 934 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 CLCN4P51793 760 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 MARC1Q5VT66 337 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF599Q96NL3 588 aa26.74■■□□□ 1.87
SHOX2-204ENST00000483851 ZNF317Q96PQ6 595 aaPredicted RBP26.74■■□□□ 1.87
SHOX2-204ENST00000483851 TTLL3Q9Y4R7 772 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms