RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LINC01553A4QN01 128 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 GREM1O60565 184 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 ALDH1A2O94788 518 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 CPP00450 1065 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 SYN1P17600 705 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 DNAJB1P25685 340 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 CORO1AP31146 461 aaKnown RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 STX2P32856 288 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 CDH4P55283 916 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 IL10RBQ08334 325 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 SERINC3Q13530 473 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 ADGRF1Q5T601 910 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 OTOP3Q7RTS5 596 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 TRABD2AQ86V40 505 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 DENND1CQ8IV53 801 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 ADAMTS19Q8TE59 1207 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 USP33Q8TEY7 942 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 DCAKDQ8WVC6 231 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 SLC44A1Q8WWI5 657 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 STAMBPL1Q96FJ0 436 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 TCF25Q9BQ70 676 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 MTIF3Q9H2K0 278 aaKnown RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 LRRC40Q9H9A6 602 aa14.33□□□□□ -0.12
CLK3-204ENST00000483723 ALG13Q9NP73 1137 aaKnown RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 RBM22Q9NW64 420 aaKnown RBP eCLIP14.33□□□□□ -0.129e-10■□□□□ 8.1
CLK3-204ENST00000483723 PSMC3IPQ9P2W1 217 aaPredicted RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 AAR2Q9Y312 384 aaKnown RBP14.33□□□□□ -0.12
CLK3-204ENST00000483723 J3KR12 359 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 GFRA2O00451 464 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 RAMP2O60895 175 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 HLA-DQB2P05538 268 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 RB1P06400 928 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 C8AP07357 584 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 CREB1P16220 341 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MGAT1P26572 445 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 CTNNB1P35222 781 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 NPY2RP49146 381 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 RENBPP51606 427 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 GNGT1P63211 74 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 GUCY1A3Q02108 690 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 SPARCL1Q14515 664 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 EFTUD2Q15029 972 aaKnown RBP eCLIP14.32□□□□□ -0.126e-7■■■■□ 21.9
CLK3-204ENST00000483723 POLD3Q15054 466 aaPredicted RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 KBTBD12Q3ZCT8 623 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 GAREM2Q75VX8 874 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 CHST9Q7L1S5 443 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 PRPF39Q86UA1 669 aaKnown RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 OR52K1Q8NGK4 314 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MZB1Q8WU39 189 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 POF1BQ8WVV4 589 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 CFAP36Q96G28 342 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 SLC22A12Q96S37 553 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 PAFAH2Q99487 392 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 DDX50Q9BQ39 737 aaKnown RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 TBK1Q9UHD2 729 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 FAM159BA6NKW6 160 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 HIDE1A8MVS5 230 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 AP3B1O00203 1094 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 ANXA9O76027 345 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 LRG1P02750 347 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MBL2P11226 248 aaPredicted RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 PFKLP17858 780 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 OR1E1P30953 314 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MSH2P43246 934 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 SLC7A9P82251 487 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 RABGAP1LQ5R372 815 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 RFWD3Q6PCD5 774 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 Q6ZNB5 142 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 LINC00523Q86TU6 105 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 CIR1Q86X95 450 aaPredicted RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 PRICKLE1Q96MT3 831 aaPredicted RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 CYP2S1Q96SQ9 504 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 SLC25A51Q9H1U9 297 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MAGEH1Q9H213 219 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 SENP1Q9P0U3 644 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 MAD1L1Q9Y6D9 718 aa14.32□□□□□ -0.12
CLK3-204ENST00000483723 ZFP37Q9Y6Q3 630 aaPredicted RBP14.32□□□□□ -0.12
CLK3-204ENST00000483723 FOXO6A8MYZ6 492 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 CLDN11O75508 207 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 FAM155BO75949 473 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 GLUD1P00367 558 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 PGAM1P18669 254 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 HDCP19113 662 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 GABRR2P28476 465 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 ADRA1AP35348 466 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 CLCN4P51793 760 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 SLC18A1P54219 525 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 GEMP55040 296 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 SESN2P58004 480 aaPredicted RBP14.31□□□□□ -0.12
CLK3-204ENST00000483723 ZXDBP98169 803 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 CAMK1Q14012 370 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 FRG1Q14331 258 aaKnown RBP14.31□□□□□ -0.12
CLK3-204ENST00000483723 TMED2Q15363 201 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 TXNDC8Q6A555 127 aa14.31□□□□□ -0.12
CLK3-204ENST00000483723 NAPEPLDQ6IQ20 393 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms