RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SHROOM3Q8TF72 1996 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 TARSL2A2RTX5 802 aaKnown RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 TMEM110-MUSTN1A8MSY1 372 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 K7ERQ8 282 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 EEF2KO00418 725 aaKnown RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 BNIP3LO60238 219 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 RAMP2O60895 175 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 RETP07949 1114 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 TMEM253P0C7T8 217 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 GOT1P17174 413 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 SSR1P43307 286 aaKnown RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 DHPSP49366 369 aaPredicted RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 TPMTP51580 245 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 RPL6Q02878 288 aaKnown RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 DLG2Q15700 870 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 PMS2CLQ68D20 193 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 ZNF776Q68DI1 518 aaPredicted RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 ARMCX6Q7L4S7 300 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 FAM124AQ86V42 546 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 TMEFF1Q8IYR6 380 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 DEFB119Q8N690 84 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 ATP11CQ8NB49 1132 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 FRS2Q8WU20 508 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 PTPRN2Q92932 1015 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 RETREG1Q9H6L5 497 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 CATSPERBQ9H7T0 1116 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 OSGEPQ9NPF4 335 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 USP36Q9P275 1121 aaKnown RBP13.71□□□□□ -0.21
SSR1-208ENST00000483409 HS3ST2Q9Y278 367 aa13.71□□□□□ -0.21
SSR1-208ENST00000483409 WDR87Q6ZQQ6 2873 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 SMAD6O43541 496 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ATP9BO43861 1147 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 RNASEH1O60930 286 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ZMPSTE24O75844 475 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 EPN2O95208 641 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 DNTTP04053 509 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 SRCP12931 536 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 CD6P30203 668 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 GJC1P36383 396 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 PSMD8P48556 350 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ARF5P84085 180 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 SLC25A11Q02978 314 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 SPEM2Q0P670 501 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 POLD3Q15054 466 aaPredicted RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 CCDC6Q16204 474 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 TXNRD3NBQ6F5E7 133 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 RFX8Q6ZV50 586 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 Q6ZVU0 165 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 LPCAT2Q7L5N7 544 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 PSTKQ8IV42 348 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 MMAAQ8IVH4 418 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 SPC24Q8NBT2 197 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 SLC35G2Q8TBE7 412 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 PANX2Q96RD6 677 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 MAGEH1Q9H213 219 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 ARRDC1-AS1Q9H2J1 176 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ITM2CQ9NQX7 267 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSR1-208ENST00000483409 ACTL7AQ9Y615 435 aa13.7□□□□□ -0.22
SSR1-208ENST00000483409 GVINP1Q7Z2Y8 2422 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 MID1O15344 667 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 DAPK3O43293 454 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 NDUFS2O75306 463 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 PROSCO94903 275 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 RARAP10276 462 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 CDC25BP30305 580 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 HTR7P34969 479 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 ETFBP38117 255 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 PTGER3P43115 390 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 CREB5Q02930 508 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 ELAVL3Q14576 367 aaKnown RBP13.69□□□□□ -0.22
SSR1-208ENST00000483409 BOLA3Q53S33 107 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 RETSATQ6NUM9 610 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 KIAA2013Q8IYS2 634 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 HMCESQ96FZ2 354 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
SSR1-208ENST00000483409 FAM129BQ96TA1 746 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 ACE2Q9BYF1 805 aaPredicted RBP13.69□□□□□ -0.22
SSR1-208ENST00000483409 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 CWC15Q9P013 229 aaKnown RBP13.69□□□□□ -0.22
SSR1-208ENST00000483409 HPCAL4Q9UM19 191 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 CFAP54Q96N23 3096 aa13.69□□□□□ -0.22
SSR1-208ENST00000483409 ADAMTS9Q9P2N4 1935 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
SSR1-208ENST00000483409 RASA4BC9J798 803 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms