RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NPNTQ6UXI9 565 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ARHGAP36Q6ZRI8 547 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 IL17RCQ8NAC3 791 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 LRRN4Q8WUT4 740 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 TTC17Q96AE7 1141 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 HAUS1Q96CS2 278 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 HERPUD2Q9BSE4 406 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 TLR10Q9BXR5 811 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 PLA2G4CQ9UP65 541 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 STARD13Q9Y3M8 1113 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 HEY1Q9Y5J3 304 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 NUP205Q92621 2012 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 CHD5Q8TDI0 1954 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 KCNK3O14649 394 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 CST8O60676 142 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 HLA-EP13747 358 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ETFBP38117 255 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 GNG11P61952 73 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ARF5P84085 180 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 SLC9A4Q6AI14 798 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 SERPINA13PQ6UXR4 307 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 VSIG1Q86XK7 387 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 FBXL6Q8N531 539 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 LZTR1Q8N653 840 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 TMEM105Q8N8V8 129 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 C2orf42Q9NWW7 574 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.24■□□□□ 0.51
CPNE1-224ENST00000483359 SAE1Q9UBE0 346 aaPredicted RBP18.24■□□□□ 0.51
CPNE1-224ENST00000483359 SLC25A13Q9UJS0 675 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ERVW-1Q9UQF0 538 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ZNF487B1APH4 448 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 DLL1O00548 723 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 MT-CO1P00395 513 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 CHRM1P11229 460 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-224ENST00000483359 CXCR5P32302 372 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 YBEYP58557 167 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-224ENST00000483359 TAZQ16635 292 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 SYNPOQ8N3V7 929 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 CLDN23Q96B33 292 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 ACE2Q9BYF1 805 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-224ENST00000483359 THAP10Q9P2Z0 257 aaPredicted RBP18.23■□□□□ 0.51
CPNE1-224ENST00000483359 SLCO3A1Q9UIG8 710 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 HPCAL4Q9UM19 191 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 RAD54BQ9Y620 910 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 ZDBF2Q9HCK1 2354 aa18.23■□□□□ 0.51
CPNE1-224ENST00000483359 ARHGAP42A6NI28 874 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 K7ERQ8 282 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SGK1O00141 431 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 TIMM44O43615 452 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ASLP04424 464 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ST8SIA6P61647 398 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MRPS21P82921 87 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SULT2A1Q06520 285 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MTAPQ13126 283 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SERINC3Q13530 473 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 PAFAH1B3Q15102 231 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 PPP2R5EQ16537 467 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 HS1BP3Q53T59 392 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 AFMIDQ63HM1 303 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ACDQ96AP0 544 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MYO19Q96H55 970 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MRGPRX3Q96LB0 322 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 OSBPL8Q9BZF1 889 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 CHRDQ9H2X0 955 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MTG2Q9H4K7 406 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 DLGAP2Q9P1A6 1054 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 STON1Q9Y6Q2 735 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MYO18AQ92614 2054 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 J3KR12 359 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 PRKCHP24723 683 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 MSNP26038 577 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 RPS9P46781 194 aaKnown RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 CLCN5P51795 746 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SLC10A2Q12908 348 aaPredicted RBP18.22■□□□□ 0.51
CPNE1-224ENST00000483359 TFDP2Q14188 446 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SEL1L2Q5TEA6 688 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 CCDC181Q5TID7 509 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ATPAF2Q8N5M1 289 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 ATP11CQ8NB49 1132 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 CCDC26Q8TAB7 109 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 WDR24Q96S15 920 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 SP110Q9HB58 689 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 KCND1Q9NSA2 647 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 DTLQ9NZJ0 730 aa18.22■□□□□ 0.51
CPNE1-224ENST00000483359 TTC34A8MYJ7 566 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 KDELR3O43731 214 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 ADAM23O75077 832 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 ZMPSTE24O75844 475 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 EPHX1P07099 455 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 HNRNPLP14866 589 aaKnown RBP eCLIP18.21■□□□□ 0.512e-8■□□□□ 10.1
CPNE1-224ENST00000483359 PECAM1P16284 738 aaPredicted RBP18.21■□□□□ 0.51
CPNE1-224ENST00000483359 NTSR1P30989 418 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 CETN2P41208 172 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 COPS2P61201 443 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 ACCSLQ4AC99 568 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 RETSATQ6NUM9 610 aa18.21■□□□□ 0.51
CPNE1-224ENST00000483359 BNIP3LO60238 219 aa18.21■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms