RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PITX1P78337 314 aaPredicted RBP13.18□□□□□ -0.3
TMEM54-206ENST00000482771 KRT85P78386 507 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 PNOCQ13519 176 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 DENND1BQ6P3S1 775 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 HSCBQ8IWL3 235 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 TMEM145Q8NBT3 493 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 ERCC4Q92889 916 aaPredicted RBP13.18□□□□□ -0.3
TMEM54-206ENST00000482771 ALG14Q96F25 216 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 PRMT1Q99873 361 aaKnown RBP13.18□□□□□ -0.3
TMEM54-206ENST00000482771 FEM1AQ9BSK4 669 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 SLC25A13Q9UJS0 675 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 ATMQ13315 3056 aa13.18□□□□□ -0.3
TMEM54-206ENST00000482771 A0A1B0GVM2 712 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 A0A1W2PQ27 194 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 A0A1W2PQ64 194 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 CSO75390 466 aaKnown RBP13.17□□□□□ -0.3
TMEM54-206ENST00000482771 GIMD1P0DJR0 217 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 ACADSBP45954 432 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 VASPP50552 380 aaPredicted RBP13.17□□□□□ -0.3
TMEM54-206ENST00000482771 UCNP55089 124 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 YWHAZP63104 245 aaKnown RBP13.17□□□□□ -0.3
TMEM54-206ENST00000482771 LY6DQ14210 128 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 TAF5Q15542 800 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF542PQ5EBM4 170 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 RABGAP1LQ5R372 815 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 CXorf57Q6NSI4 855 aaKnown RBP13.17□□□□□ -0.3
TMEM54-206ENST00000482771 FBXL22Q6P050 247 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 Q6ZVU0 165 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 OR13H1Q8NG92 308 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 LMO3Q8TAP4 145 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 RNF34Q969K3 372 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 APOLD1Q96LR9 279 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 DEPDC7Q96QD5 511 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 MED15Q96RN5 788 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 TRIM62Q9BVG3 475 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 SLC4A5Q9BY07 1137 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 SEMA4CQ9C0C4 833 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 POLR1BQ9H9Y6 1135 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 POPDC2Q9HBU9 364 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 METTL14Q9HCE5 456 aaKnown RBP13.17□□□□□ -0.3
TMEM54-206ENST00000482771 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
TMEM54-206ENST00000482771 SYNJ2BP-COX16A0A087WUM0 186 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 TRIM49BA6NDI0 452 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 TCAF2A6NFQ2 919 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 NEMP2A6NFY4 417 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 CYSRT1A8MQ03 144 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ALOX15BO15296 676 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 PIAS2O75928 621 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 DXOO77932 396 aaKnown RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 MT-CO1P00395 513 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ALPPL2P10696 532 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 SLC2A3P11169 496 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 AKT2P31751 481 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 DUSP3P51452 185 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 CLDN2P57739 230 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ERVPABLB-1P60509 514 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 CETN1Q12798 172 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF177Q13360 481 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 EIF4EBP2Q13542 120 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 PIP5KL1Q5T9C9 394 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ZNF658Q5TYW1 1059 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 NEK5Q6P3R8 708 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 TMEM110Q86TL2 294 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ARHGEF19Q8IW93 802 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 EHBP1Q8NDI1 1231 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 STK32AQ8WU08 396 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 CCDC34Q96HJ3 373 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 RPRD1AQ96P16 312 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 NOX5Q96PH1 765 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 DPH1Q9BZG8 443 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 THAP9Q9H5L6 903 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 FZD3Q9NPG1 666 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 RMND1Q9NWS8 449 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 COX16Q9P0S2 106 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 ZDHHC9Q9Y397 364 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 FARP1Q9Y4F1 1045 aaPredicted RBP13.16□□□□□ -0.3
TMEM54-206ENST00000482771 OR51B4Q9Y5P0 310 aa13.16□□□□□ -0.3
TMEM54-206ENST00000482771 B8ZZF3 427 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 E5RJQ4 531 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 K7ESM1 405 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 KPNA3O00505 521 aaPredicted RBP13.15□□□□□ -0.3
TMEM54-206ENST00000482771 SCAMP1O15126 338 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 PMM2O15305 246 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 NEBLO76041 1014 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 PCDH8O95206 1070 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 GP1BAP07359 652 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 CTSLP07711 333 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 KRT5P13647 590 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 CCR1P32246 355 aa13.15□□□□□ -0.3
TMEM54-206ENST00000482771 CHRNA3P32297 505 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms