RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PIGRP01833 764 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 IQCF3P0C7M6 154 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 CDH5P33151 784 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TTC33Q6PID6 262 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 TRIM74Q86UV6 250 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 ZNF513Q8N8E2 541 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 FAM47BQ8NA70 645 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 CNDP1Q96KN2 507 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 RTKNQ9BST9 563 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 COQ10BQ9H8M1 238 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 AP4S1Q9Y587 144 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 ATG7O95352 703 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 CLIC3O95833 236 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 JUNP05412 331 aaKnown RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 TFPTP0C1Z6 253 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 NCAM1P13591 858 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 LMO2P25791 158 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TPP2P29144 1249 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 NDUFV1P49821 464 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 MTTPP55157 894 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 STX1BP61266 288 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TNFAIP2Q03169 654 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 DCTN2Q13561 401 aaKnown RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 CEACAM7Q14002 265 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 CCDC153Q494R4 210 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 FUT11Q495W5 492 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 KLC3Q6P597 504 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 DDIASQ8IXT1 998 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 GRIN3AQ8TCU5 1115 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 FCRL3Q96P31 734 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 CPNE1Q99829 537 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 PLAC1Q9HBJ0 212 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 DDIT4Q9NX09 232 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 C6orf203Q9P0P8 240 aaPredicted RBP12.94□□□□□ -0.34
VPS52-218ENST00000482399 TUBGCP4Q9UGJ1 667 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 ZDHHC2Q9UIJ5 367 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 ATAD5Q96QE3 1844 aa12.94□□□□□ -0.34
VPS52-218ENST00000482399 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 TFAP2AP05549 437 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 GRIA3P42263 894 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ATP1A4Q13733 1029 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 FBXO48Q5FWF7 155 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 GRTP1Q5TC63 336 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 C16orf87Q6PH81 154 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 LCLAT1Q6UWP7 414 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 PDZD4Q76G19 769 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 ZNF534Q76KX8 674 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CATSPER1Q8NEC5 780 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 TRIM8Q9BZR9 551 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CYP3A43Q9HB55 503 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 PNPLA8Q9NP80 782 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 PCDHB12Q9Y5F1 795 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 XIRP1Q702N8 1843 aaKnown RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 SBF2Q86WG5 1849 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 SUPT7LO94864 414 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 NFKB1P19838 968 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 PCSK6P29122 969 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 PPARGP37231 505 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 PSME3P61289 254 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CDKL1Q00532 357 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 NEDD8Q15843 81 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 TBC1D25Q3MII6 688 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 TREML2Q5T2D2 321 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ATG14Q6ZNE5 492 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 DENND6AQ8IWF6 608 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 RNF168Q8IYW5 571 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 RMND5BQ96G75 393 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 NIFKQ9BYG3 293 aaKnown RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 DNAJC28Q9NX36 388 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ARHGEF38Q9NXL2 777 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CACNG4Q9UBN1 327 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ACOT9Q9Y305 439 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 GCATO75600 419 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 PSMD7P51665 324 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CCR3P51677 355 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 MAP3K7CLP57077 242 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 CACNB2Q08289 660 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 NCBP2-AS2Q69YL0 99 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 ACMSDQ8TDX5 336 aa12.93□□□□□ -0.34
VPS52-218ENST00000482399 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
VPS52-218ENST00000482399 PDLIM1O00151 329 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 ATP6V1G1O75348 118 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 ERCC2P18074 760 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 TPSB2P20231 275 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 NMBRP28336 390 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 CDH13P55290 713 aa12.92□□□□□ -0.34
VPS52-218ENST00000482399 MPP1Q00013 466 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms