RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 NEUROG2Q9H2A3 272 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 EBF2Q9HAK2 575 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 CNOT8Q9UFF9 292 aaKnown RBP11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 SUN2Q9UH99 717 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 PCSK1NQ9UHG2 260 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 CDV3Q9UKY7 258 aaKnown RBP11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 FZD10Q9ULW2 581 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 NENFQ9UMX5 172 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 MFHAS1Q9Y4C4 1052 aa11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 CNOT1A5YKK6 2376 aaKnown RBP11.69□□□□□ -0.54
RAPGEF1-207ENST00000481260 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 EDDM13A0A1B0GTR0 161 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 FAM47DPA6NHR8 397 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CBX4O00257 560 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC30A4O14863 429 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 TM4SF5O14894 197 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 WNT9AO14904 365 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 RTN2O75298 545 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CFIP05156 583 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 ACADMP11310 421 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 PSMA2P25787 234 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 IL1R2P27930 398 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 GKP32189 559 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC8A1P32418 973 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 DRD3P35462 400 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 GNA12Q03113 381 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SCAPQ12770 1279 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SEMA3BQ13214 749 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLC12A1Q13621 1099 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 KCNT1Q5JUK3 1230 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 LRRC31Q6UY01 552 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 SLFN11Q7Z7L1 901 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 TP53INP2Q8IXH6 220 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 GPR161Q8N6U8 529 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 ZNF557Q8N988 423 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 GANCQ8TET4 914 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 NTAN1Q96AB6 310 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 KCTD15Q96SI1 283 aaPredicted RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 THAP2Q9H0W7 228 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 ISCUQ9H1K1 167 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 MIR1-1HGQ9H1L0 117 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CAAP1Q9H8G2 361 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CAPN10Q9HC96 672 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 FBXL12Q9NXK8 326 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 PPARGC1AQ9UBK2 798 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 EIF2B4Q9UI10 523 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 CEP192Q8TEP8 1941 aa11.68□□□□□ -0.54
RAPGEF1-207ENST00000481260 DOCK4Q8N1I0 1966 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 PCDH15Q96QU1 1955 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ADAMTS9Q9P2N4 1935 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 TARSL2A2RTX5 802 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 METTL12A8MUP2 240 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 MEI4A8MW99 385 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 GIPC1O14908 333 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 KHNYNO15037 678 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 CREB3O43889 395 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 RNASEH2AO75792 299 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SEMA4FO95754 770 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 IL1BP01584 269 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 DNTTP04053 509 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SERPING1P05155 500 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 IGHV4-34P06331 123 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 GZMAP12544 262 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 RHOQP17081 205 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ENGP17813 658 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 MIPP30301 263 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ADKP55263 362 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 PPP2CBP62714 309 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 PPP2CAP67775 309 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 NRG1Q02297 640 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 GFPT1Q06210 699 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 NCEH1Q6PIU2 408 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 DGLUCYQ7Z3D6 616 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SETD3Q86TU7 594 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 GAS2L3Q86XJ1 694 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 VSTM4Q8IW00 320 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 RGL4Q8IZJ4 473 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 HDDC3Q8N4P3 179 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ATP11CQ8NB49 1132 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 KDM1BQ8NB78 822 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 OR2A12Q8NGT7 310 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 OR6K2Q8NGY2 324 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 NETO1Q8TDF5 533 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SNX19Q92543 992 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SYN2Q92777 582 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARHGEF2Q92974 986 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ARRDC3Q96B67 414 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 TBC1D31Q96DN5 1066 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 VCPIP1Q96JH7 1222 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 CHP1Q99653 195 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 SNRNP25Q9BV90 132 aaKnown RBP11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 NUP58Q9BVL2 599 aa11.67□□□□□ -0.54
RAPGEF1-207ENST00000481260 ACE2Q9BYF1 805 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms