RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 CTAGE15A4D2H0 777 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 C19orf67A6NJJ6 358 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 H7C0C1 242 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CCDC188H7C350 402 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 KCNK1O00180 336 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 TTI1O43156 1089 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 RAD51CO43502 376 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PRAMEF11O60813 436 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 GJB3O75712 270 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CD160O95971 181 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ITGAVP06756 1048 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ZSCAN5DPP0CG00 497 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CTAGE8P0CG41 777 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ETS1P14921 441 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CHRNA3P32297 505 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ATP5OP48047 213 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 FNTAP49354 379 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 STK19P49842 368 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 YBEYP58557 167 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 AP1B1Q10567 949 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 WASHC5Q12768 1159 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 XRCC4Q13426 336 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 POLD3Q15054 466 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PDK1Q15118 436 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PLEKHG6Q3KR16 790 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ITPRIPL2Q3MIP1 535 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 DRICH1Q6PGQ1 229 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CCDC137Q6PK04 289 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 LINGO4Q6UY18 593 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ZNF783Q6ZMS7 281 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CTAGE6Q86UF2 777 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CDKL3Q8IVW4 592 aaPredicted RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CTAGE4Q8IX94 777 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CCDC13Q8IYE1 715 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ALLCQ8N6M5 410 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CEP112Q8N8E3 955 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 FAM71DQ8N9W8 422 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 DCAF4L2Q8NA75 395 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CCNYQ8ND76 341 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 SORCS1Q8WY21 1168 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 CCDC114Q96M63 670 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 TSGA13Q96PP4 275 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 MUC3BQ9H195 1237 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 MAGEH1Q9H213 219 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 RETREG1Q9H6L5 497 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 SP110Q9HB58 689 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 FBRSL1Q9HCM7 1045 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ATP13A1Q9HD20 1204 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 HEBP1Q9NRV9 189 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 RYDENQ9NUL5 291 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 IGSF9Q9P2J2 1179 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 PCYOX1Q9UHG3 505 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 IPO11Q9UI26 975 aaKnown RBP9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 RAD54BQ9Y620 910 aa9.16□□□□□ -0.94
NUDCD3-208ENST00000480209 ZSCAN5CA6NGD5 496 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 ARHGAP42A6NI28 874 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 RNF103O00237 685 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 CBX4O00257 560 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 PPP1R12AO14974 1030 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MUSKO15146 869 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 KCNN4O15554 427 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 KDELR3O43731 214 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SLU7O95391 586 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MT-CO1P00395 513 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 HLA-DQB2P05538 268 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 BMP1P13497 986 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MX2P20592 715 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 PTPN3P26045 913 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 CTHP32929 405 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 RGRP47804 291 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 DGKGP49619 791 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 PLK1P53350 603 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 OXCT1P55809 520 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 IFI35P80217 286 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 IL10RBQ08334 325 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SLC10A7Q0GE19 358 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 TRIP13Q15645 432 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 IL31Q6EBC2 164 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 DARS2Q6PI48 645 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 JAMLQ86YT9 394 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 PGBD5Q8N414 524 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MMGT1Q8N4V1 131 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 CNTD1Q8N815 330 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 USP33Q8TEY7 942 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 TFB1MQ8WVM0 346 aaKnown RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 HTR3CQ8WXA8 447 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MAML1Q92585 1016 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SLCO2A1Q92959 643 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 RTP4Q96DX8 246 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 MYO19Q96H55 970 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 NSMCE3Q96MG7 304 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 GORASP1Q9BQQ3 440 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 SLC2A11Q9BYW1 496 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 CD320Q9NPF0 282 aa9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 KIAA1522Q9P206 1035 aaPredicted RBP9.15□□□□□ -0.94
NUDCD3-208ENST00000480209 VPS28Q9UK41 221 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms