RNA–Protein interactions for RNA: ENST00000480187.5

NUP58-211, Transcript of nucleoporin 58, humanhuman

TSL 2

Gene NUP58, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-211ENST00000480187 TSC1Q92574 1164 aa16.1■□□□□ 0.17
NUP58-211ENST00000480187 VPS28Q9UK41 221 aa16.1■□□□□ 0.17
NUP58-211ENST00000480187 CACNA1GO43497 2377 aa16.1■□□□□ 0.17
NUP58-211ENST00000480187 A0A087WV48 116 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 M0QYT0 321 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 PLK4O00444 970 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 ZNF18P17022 549 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 KRT9P35527 623 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 HNF1BP35680 557 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 ACADVLP49748 655 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 CNTN1Q12860 1018 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 DNAJC3Q13217 504 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 PTPN20Q4JDL3 420 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 Q6ZVU0 165 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 KANSL1Q7Z3B3 1105 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 C14orf80Q86SX3 495 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 SPATS2Q86XZ4 545 aaKnown RBP16.09■□□□□ 0.17
NUP58-211ENST00000480187 IRF2BP1Q8IU81 584 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 SIX2Q9NPC8 291 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 TMEM51Q9NW97 253 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 ARHGEF38Q9NXL2 777 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 DNAJC12Q9UKB3 198 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 HS3ST2Q9Y278 367 aa16.09■□□□□ 0.17
NUP58-211ENST00000480187 NBEAQ8NFP9 2946 aa16.08■□□□□ 0.17
NUP58-211ENST00000480187 ADAMTS20P59510 1910 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 PRAMEF26H0Y7S4 382 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 CBX4O00257 560 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 RNGTTO60942 597 aaKnown RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 SRCP12931 536 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 JUPP14923 745 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 MAT2AP31153 395 aaKnown RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 CLCN1P35523 988 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 CXCR3P49682 368 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 KRT83P78385 493 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 BNIP3Q12983 259 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 ILKQ13418 452 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 STAT4Q14765 748 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 ACAP1Q15027 740 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 BRMS1LQ5PSV4 323 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 ACBD5Q5T8D3 534 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 OTUD1Q5VV17 481 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 SLC47A2Q86VL8 602 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 PGAP3Q96FM1 320 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 CCDC114Q96M63 670 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 NPY6RQ99463 290 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 C2orf49Q9BVC5 232 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 MUC3BQ9H195 1237 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 WDCPQ9H6R7 721 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 PIGVQ9NUD9 493 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 AJAP1Q9UKB5 411 aaPredicted RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 STAP1Q9ULZ2 295 aa16.08■□□□□ 0.16
NUP58-211ENST00000480187 NYNRINQ9P2P1 1898 aaKnown RBP16.08■□□□□ 0.16
NUP58-211ENST00000480187 FOXN3O00409 490 aaPredicted RBP16.07■□□□□ 0.16
NUP58-211ENST00000480187 GGCXP38435 758 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 MTIF2P46199 727 aaKnown RBP16.07■□□□□ 0.16
NUP58-211ENST00000480187 TAS2R38P59533 333 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 BPIFB4P59827 614 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 CCDC15Q0P6D6 951 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 CAMK4Q16566 473 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 SOWAHCQ53LP3 525 aaPredicted RBP16.07■□□□□ 0.16
NUP58-211ENST00000480187 C6orf118Q5T5N4 469 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 NEK5Q6P3R8 708 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 SETD3Q86TU7 594 aaPredicted RBP16.07■□□□□ 0.16
NUP58-211ENST00000480187 ZNF683Q8IZ20 524 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 MLKLQ8NB16 471 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 NXPE2Q96DL1 559 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 TKTL2Q9H0I9 626 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 SIK2Q9H0K1 926 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.07■□□□□ 0.16
NUP58-211ENST00000480187 FARP1Q9Y4F1 1045 aaPredicted RBP16.07■□□□□ 0.16
NUP58-211ENST00000480187 PAXBP1Q9Y5B6 917 aa16.07■□□□□ 0.16
NUP58-211ENST00000480187 DRGXA6NNA5 263 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 I6L893 689 aaPredicted RBP16.06■□□□□ 0.16
NUP58-211ENST00000480187 CNTN5O94779 1100 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 ADCY5O95622 1261 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 MT-CO1P00395 513 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 F9P00740 461 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 CTSLP07711 333 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 RHOCP08134 193 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 CKMT2P17540 419 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 CHRNA3P32297 505 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 CDH5P33151 784 aaPredicted RBP16.06■□□□□ 0.16
NUP58-211ENST00000480187 SCNN1AP37088 669 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 GABRB2P47870 512 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 CLCN6P51797 869 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 UBE2HP62256 183 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 POM121L1PQ3SYA9 428 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 ALFQ53S48 1182 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 PIP5KL1Q5T9C9 394 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 FBXL19Q6PCT2 694 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 FAM71AQ8IYT1 594 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 ATP11CQ8NB49 1132 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 TMEM145Q8NBT3 493 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 TMEM35BQ8NCS4 154 aa16.06■□□□□ 0.16
NUP58-211ENST00000480187 TMIEQ8NEW7 156 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms