RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 ZCCHC17Q9NP64 241 aaKnown RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 DMAP1Q9NPF5 467 aaPredicted RBP4.3□□□□□ -1.72
CMSS1-204ENST00000479555 CHST12Q9NRB3 414 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 DACT1Q9NYF0 836 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 XPR1Q9UBH6 696 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 SHOC2Q9UQ13 582 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 TSPOAP1O95153 1857 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 NRXN1Q9ULB1 1477 aa4.3□□□□□ -1.72
CMSS1-204ENST00000479555 KDM6AO15550 1401 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MYO5CQ9NQX4 1742 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 KIAA1210Q9ULL0 1709 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MSH6P52701 1360 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ABCC4O15439 1325 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SH3TC1Q8TE82 1336 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ABCA8O94911 1581 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 A0A087WWL8 130 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 POM121BA6NF01 834 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 POC1B-GALNT4F8VUJ3 575 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PYCARD-AS1I3L0S3 204 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 IPO5O00410 1097 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 KPNA5O15131 536 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 THAP12O43422 761 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MGRN1O60291 552 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 FAM107AO95990 144 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 FGBP02675 491 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 LRPAP1P30533 357 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 STT3AP46977 705 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 FNTAP49354 379 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ACADVLP49748 655 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 CCNG1P51959 295 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 GNGT1P63211 74 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF543Q08ER8 600 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 CUL4BQ13620 913 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 TRIM14Q14142 442 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 KRT72Q14CN4 511 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 LY6KQ17RY6 165 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 INSCQ1MX18 579 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MGAT5BQ3V5L5 792 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MIDNQ504T8 468 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 GLE1Q53GS7 698 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 LACTB2Q53H82 288 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 RNASE12Q5GAN4 147 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SPECC1LQ69YQ0 1117 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SFRP4Q6FHJ7 346 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 KIAA1161Q6NSJ0 714 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 TRIM65Q6PJ69 517 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 CWC27Q6UX04 472 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 OLFM4Q6UX06 510 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 BEND5Q7L4P6 421 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SLC15A3Q8IY34 581 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 YAF2Q8IY57 180 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 GALNT4Q8N4A0 578 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PDILTQ8N807 584 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ANKRD44Q8N8A2 993 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 RP9Q8TA86 221 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 DEPTORQ8TB45 409 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 BRI3BPQ8WY22 251 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SPSB4Q96A44 273 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF653Q96CK0 615 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 COQ8BQ96D53 544 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SCLT1Q96NL6 688 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 CTAGE1Q96RT6 745 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 NAPGQ99747 312 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PTDSS2Q9BVG9 487 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 EIF2AQ9BY44 585 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MAF1Q9H063 256 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ALDH8A1Q9H2A2 487 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MMADHCQ9H3L0 296 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ZWILCHQ9H900 591 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SLC40A1Q9NP59 571 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 STK32BQ9NY57 414 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MIS18AQ9NYP9 233 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ATXN10Q9UBB4 475 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 RGS17Q9UGC6 210 aaPredicted RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 NRBP1Q9UHY1 535 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 NDRG4Q9ULP0 352 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PPP2R2CQ9Y2T4 447 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 C15orf41Q9Y2V0 281 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 DUOX2Q9NRD8 1548 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 ZNF518AQ6AHZ1 1483 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 MAGI2Q86UL8 1455 aa4.29□□□□□ -1.72
CMSS1-204ENST00000479555 PPRC1Q5VV67 1664 aaKnown RBP4.29□□□□□ -1.72
CMSS1-204ENST00000479555 SBNO1A3KN83 1393 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 KIF13AQ9H1H9 1805 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 LMTK2Q8IWU2 1503 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 LY6G6EA0A0G2JKS1 128 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 TCRBV5S1A1TA0A578 114 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 USP27XA6NNY8 438 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 H7C1Q1 480 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 AP4M1O00189 453 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 AP5Z1O43299 807 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 USP1O94782 785 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 SERPINC1P01008 464 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CSF1RP07333 972 aa4.28□□□□□ -1.72
CMSS1-204ENST00000479555 ANXA2P07355 339 aaKnown RBP4.28□□□□□ -1.72
CMSS1-204ENST00000479555 CPA3P15088 417 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms