RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 TMC7Q7Z402 723 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 KYQ8NBH2 561 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 MPP4Q96JB8 637 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 CDK5RAP1Q96SZ6 601 aaKnown RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 TBC1D10AQ9BXI6 508 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 CDHR5Q9HBB8 845 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 ATP13A1Q9HD20 1204 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 BCLAF3A2AJT9 711 aaKnown RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 URODP06132 367 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 CDH2P19022 906 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 PTPN9P43378 593 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 BRCC3P46736 316 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 DEFA1P59665 94 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 DEFA3P59666 94 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 TBL3Q12788 808 aaKnown RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 AASDHQ4L235 1098 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 SYT17Q9BSW7 474 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 MINDY3Q9H8M7 445 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 RGS18Q9NS28 235 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 RCOR3Q9P2K3 495 aaPredicted RBP14.57□□□□□ -0.08
COL20A1-206ENST00000479501 VTI1BQ9UEU0 232 aa14.57□□□□□ -0.08
COL20A1-206ENST00000479501 UBDO15205 165 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 HLA-DPA1P20036 260 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 DMC1Q14565 340 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 SLC1A5Q15758 541 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 AGKQ53H12 422 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 LGI2Q8N0V4 545 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 RFWD2Q8NHY2 731 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 NDRG1Q92597 394 aaKnown RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 SLCO2A1Q92959 643 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 UROC1Q96N76 676 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 FAM192AQ9GZU8 254 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 LGALS13Q9UHV8 139 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 CLUHO75153 1309 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 FAM95CA0A1B0GW59 222 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 PRPF4O43172 522 aaKnown RBP eCLIP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 PAPSS1O43252 624 aaPredicted RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 PIGNO95427 931 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 CREB1P16220 341 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 CCDC15Q0P6D6 951 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 MTA1Q13330 715 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 CLPBQ9H078 707 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 APPL1Q9UKG1 709 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 TIAM2Q8IVF5 1701 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 LGR5O75473 907 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 CABYRO75952 493 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 SERPINH1P50454 418 aaKnown RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 POU5F1Q01860 360 aaKnown RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 PTK2BQ14289 1009 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 ARCQ7LC44 396 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 DEFB128Q7Z7B8 93 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 MCRS1Q96EZ8 462 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 TRAPPC9Q96Q05 1148 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 SMPD4Q9NXE4 827 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 FAM53CQ9NYF3 392 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 V9GYQ6 96 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 AKAP11Q9UKA4 1901 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 PAX3P23760 479 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 LILRA4P59901 499 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 RGMBQ6NW40 437 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 DDX53Q86TM3 631 aaKnown RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 SNX27Q96L92 541 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 UTP6Q9NYH9 597 aaKnown RBP14.56□□□□□ -0.08
COL20A1-206ENST00000479501 WWOXQ9NZC7 414 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 ADAM28Q9UKQ2 775 aa14.56□□□□□ -0.08
COL20A1-206ENST00000479501 TMEM247A6NEH6 219 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 WDR47O94967 919 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 PLK1P53350 603 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 AIF1P55008 147 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 ARHGAP1Q07960 439 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 SYTL3Q4VX76 610 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 ZC3H12BQ5HYM0 836 aaKnown RBP14.55□□□□□ -0.08
COL20A1-206ENST00000479501 NIPA2Q8N8Q9 360 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 LPCAT1Q8NF37 534 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 SYBUQ9NX95 663 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 STYXL1Q9Y6J8 313 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 TUSC3Q13454 348 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 PACS1Q6VY07 963 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 SH3KBP1Q96B97 665 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 FOPNLQ96NB1 174 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 KLHL25Q9H0H3 589 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 DPEP3Q9H4B8 488 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 PDE4DIPQ5VU43 2346 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 TPSB2P20231 275 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 IFNA8P32881 189 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 TUFMP49411 452 aaKnown RBP14.55□□□□□ -0.08
COL20A1-206ENST00000479501 NME5P56597 212 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 TPSAB1Q15661 275 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 ADGRD1Q6QNK2 874 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 SZRD1Q7Z422 152 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 HS6ST3Q8IZP7 471 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 POLR1EQ9GZS1 481 aaKnown RBP14.55□□□□□ -0.08
COL20A1-206ENST00000479501 AAASQ9NRG9 546 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 HMGXB4Q9UGU5 601 aa14.55□□□□□ -0.08
COL20A1-206ENST00000479501 FAM58BPP0C7Q3 252 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ITGALP20701 1170 aa14.54□□□□□ -0.08
COL20A1-206ENST00000479501 ROR2Q01974 943 aaKnown RBP14.54□□□□□ -0.08
COL20A1-206ENST00000479501 FSTL1Q12841 308 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms