RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PLEKHA7Q6IQ23 1121 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 C16orf46Q6P387 395 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TTC23LQ6PF05 361 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 VASH1Q7L8A9 365 aaPredicted RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 COLGALT2Q8IYK4 626 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 PDCD6IPQ8WUM4 868 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 DDX1Q92499 740 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CPT1BQ92523 772 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 GPR20Q99678 358 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TUBA1CQ9BQE3 449 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 WDR83Q9BRX9 315 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 MRPL47Q9HD33 250 aaKnown RBP13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 CPQQ9Y646 472 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 SZT2Q5T011 3432 aa13.4□□□□□ -0.26
CNKSR3-204ENST00000479339 TCRBV9S1A1TA0A576 114 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 GOLGA8SH3BPF8 625 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 GOLGA8MH3BSY2 632 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 SGK1O00141 431 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 GCATO75600 419 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 KRT75O95678 551 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 FOSP01100 380 aaPredicted RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 LGALS2P05162 132 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ITGB5P18084 799 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 KPNA1P52294 538 aaPredicted RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 MGAT5BQ3V5L5 792 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 MSS51Q4VC12 460 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 LIN9Q5TKA1 542 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CES4AQ5XG92 561 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 XKR5Q6UX68 686 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 OTOP2Q7RTS6 562 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ZNF677Q86XU0 584 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 UBR7Q8N806 425 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 LILRB4Q8NHJ6 448 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ATP2A3Q93084 1043 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 TIFAQ96CG3 184 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 SLITRK1Q96PX8 696 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CDX2Q99626 313 aaPredicted RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 KLHL25Q9H0H3 589 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ANKMY1Q9P2S6 941 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 SATB2Q9UPW6 733 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 DNAJC16Q9Y2G8 782 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 LAMA3Q16787 3333 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 NOTOA8MTQ0 251 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 GRXCR1A8MXD5 290 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 AREL1O15033 823 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 WEE2P0C1S8 567 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 SELPP16109 830 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 KCNA2P16389 499 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CD58P19256 250 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PROZP22891 400 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 HOXC8P31273 242 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 IDH3AP50213 366 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CTBSQ01459 385 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 GRSF1Q12849 480 aaKnown RBP eCLIP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 IKBKEQ14164 716 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PPP2R5DQ14738 602 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 RAB30Q15771 203 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 TRIM71Q2Q1W2 868 aaKnown RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 BBS9Q3SYG4 887 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 AARS2Q5JTZ9 985 aaKnown RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 LRRC38Q5VT99 294 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 ZNF720Q7Z2F6 126 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 SLC15A4Q8N697 577 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 OR7G1Q8NGA0 311 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 HPS1Q92902 700 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 NACC2Q96BF6 587 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 KREMEN1Q96MU8 473 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PBX4Q9BYU1 374 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CDH19Q9H159 772 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 IPO11Q9UI26 975 aaKnown RBP13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 CDC14AQ9UNH5 594 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 PRELID1Q9Y255 219 aa13.39□□□□□ -0.27
CNKSR3-204ENST00000479339 A0A1W2PPW3 197 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 H3BRB1 525 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 MEIS1O00470 390 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 SLC22A2O15244 555 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 SLC22A1O15245 554 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 S100BP04271 92 aaPredicted RBP13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 GABRB3P28472 473 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 PEX3P56589 373 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 TAS2R40P59535 323 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 ITGADQ13349 1161 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 ZNF846Q147U1 533 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 PIGGQ5H8A4 983 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 DEFB128Q7Z7B8 93 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 C12orf56Q8IXR9 622 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 SIX6OS1Q8N1H7 587 aa13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
CNKSR3-204ENST00000479339 ALPK1Q96QP1 1244 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms