RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 KTI12Q96EK9 354 aaPredicted RBP5.54□□□□□ -1.52
RFC4-212ENST00000479307 TRMT61AQ96FX7 289 aaKnown RBP5.54□□□□□ -1.52
RFC4-212ENST00000479307 CCDC17Q96LX7 622 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 MACROD1Q9BQ69 325 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 CHODLQ9H9P2 273 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 CPNE5Q9HCH3 593 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 SLC13A4Q9UKG4 626 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 RAB21Q9UL25 225 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 MAFFQ9ULX9 164 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 SLC12A4Q9UP95 1085 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 LZTS1Q9Y250 596 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 RRP7AQ9Y3A4 280 aaKnown RBP5.54□□□□□ -1.52
RFC4-212ENST00000479307 NSD3Q9BZ95 1437 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 C4AP0C0L4 1744 aa5.54□□□□□ -1.52
RFC4-212ENST00000479307 FAM208AQ9UK61 1670 aaKnown RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 A0A1B0GVC2 190 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 POC1B-GALNT4F8VUJ3 575 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 UBE2Q2LH0YL09 131 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 CLIC1O00299 241 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 GCATO75600 419 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 HEXIM1O94992 359 aaKnown RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 CHRM5P08912 532 aaPredicted RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 CNPP09543 421 aaKnown RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 ATF7P17544 494 aaPredicted RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 RXRAP19793 462 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 RCAN1P53805 252 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 MAP3K21Q5TCX8 1036 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 SUMO4Q6EEV6 95 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 LVRNQ6Q4G3 990 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 PCSK4Q6UW60 755 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 GALNT4Q8N4A0 578 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 ASB12Q8WXK4 309 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 COG8Q96MW5 612 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 PCED1AQ9H1Q7 454 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 INSL6Q9Y581 213 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 PCDHA10Q9Y5I2 948 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 SIRT4Q9Y6E7 314 aaPredicted RBP5.53□□□□□ -1.52
RFC4-212ENST00000479307 COL6A3P12111 3177 aa5.53□□□□□ -1.52
RFC4-212ENST00000479307 LTN1O94822 1766 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 CCDC88AQ3V6T2 1871 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 TCRBV5S1A1TA0A578 114 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 TSPAN3O60637 253 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 CYP21A2P08686 494 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 NDUFS1P28331 727 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 HOXD12P35452 270 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 VAMP2P63027 116 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 SLC12A1Q13621 1099 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 INTS11Q5TA45 600 aaKnown RBP5.52□□□□□ -1.53
RFC4-212ENST00000479307 SERPINA13PQ6UXR4 307 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 KYAT3Q6YP21 454 aaKnown RBP5.52□□□□□ -1.53
RFC4-212ENST00000479307 SLC39A5Q6ZMH5 540 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 BBS12Q6ZW61 710 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 ARHGEF25Q86VW2 580 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 CPOQ8IVL8 374 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 ZNF845Q96IR2 970 aaPredicted RBP5.52□□□□□ -1.53
RFC4-212ENST00000479307 TWNKQ96RR1 684 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 UBA5Q9GZZ9 404 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 KLK15Q9H2R5 256 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 PDE11AQ9HCR9 933 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 WASH6PQ9NQA3 447 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 SEMA4GQ9NTN9 838 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 ASB6Q9NWX5 421 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 SH3BP4Q9P0V3 963 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 DNAJC16Q9Y2G8 782 aa5.52□□□□□ -1.53
RFC4-212ENST00000479307 COPG1Q9Y678 874 aaKnown RBP5.52□□□□□ -1.53
RFC4-212ENST00000479307 PASKQ96RG2 1323 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 DICER1Q9UPY3 1922 aaKnown RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 GLTPD2A6NH11 291 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 AGAP5A6NIR3 686 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 HOXC11O43248 304 aaPredicted RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 SH3BP5O60239 455 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 EIF5BO60841 1220 aaKnown RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 PROP1O75360 226 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 PYGLP06737 847 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 TNNT1P13805 278 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 SFPQP23246 707 aaKnown RBP eCLIP5.51□□□□□ -1.53
RFC4-212ENST00000479307 PNPLA4P41247 253 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 AGTR2P50052 363 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 MAP2K1Q02750 393 aaPredicted RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 CHRNDQ07001 517 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 KLF10Q13118 480 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 PDCLQ13371 301 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 TRPC3Q13507 836 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 CERKLQ49MI3 558 aaPredicted RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 JAKMIP3Q5VZ66 844 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 NAXEQ8NCW5 288 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 SENP7Q9BQF6 1050 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 HTATIP2Q9BUP3 242 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 SFXN1Q9H9B4 322 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 PRDM16Q9HAZ2 1276 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 PLEKHA2Q9HB19 425 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 ARPP21Q9UBL0 812 aaPredicted RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 ADAM21Q9UKJ8 722 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 DLEC1Q9Y238 1755 aa5.51□□□□□ -1.53
RFC4-212ENST00000479307 MAP2P11137 1827 aaKnown RBP5.51□□□□□ -1.53
RFC4-212ENST00000479307 CUL9Q8IWT3 2517 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms