RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 PACSIN3Q9UKS6 424 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 PSMD13Q9UNM6 376 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 TRIM43BA6NCK2 446 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 SIN3BO75182 1162 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 ARL4AP40617 200 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 NUMBP49757 651 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 CCR3P51677 355 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 RPL10AP62906 217 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 GSTM4Q03013 218 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 BST2Q10589 180 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 NCBP2-AS2Q69YL0 99 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 NOTUMQ6P988 496 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 COLGALT1Q8NBJ5 622 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 APPL2Q8NEU8 664 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 PGBD4Q96DM1 585 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 MAF1Q9H063 256 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 VTA1Q9NP79 307 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 RSL24D1Q9UHA3 163 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 SNX10Q9Y5X0 201 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 PSAT1Q9Y617 370 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 LAMA2P24043 3122 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 M0QYT0 321 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 RFPL1O75677 317 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 KLHL2O95198 593 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 YBX3P16989 372 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 ZFXP17010 805 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 PSMB4P28070 264 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 AFF1P51825 1210 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 MAP3K7CLP57077 242 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 IFRD2Q12894 506 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 TWF2Q6IBS0 349 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 CDKL3Q8IVW4 592 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 SIGLEC10Q96LC7 697 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 ZNF670Q9BS34 389 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 UBP1Q9NZI7 540 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 C6orf203Q9P0P8 240 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 ZNF180Q9UJW8 692 aa14.4□□□□□ -0.1
CCDC78-210ENST00000478979 APOBEC2Q9Y235 224 aaKnown RBP14.4□□□□□ -0.1
CCDC78-210ENST00000478979 SH3PXD2BA1X283 911 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 GOLGA8TH3BQL2 631 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ERVK-10P10266 1014 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 TSHRP16473 764 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 MTTPP55157 894 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 NAA20P61599 178 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 OSTM1Q86WC4 334 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ERI1Q8IV48 349 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 WDR75Q8IWA0 830 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 HTR3CQ8WXA8 447 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ZNF778Q96MU6 729 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ZNF358Q9NW07 568 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 CPA4Q9UI42 421 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 KIAA1257Q9ULG3 409 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 GNEQ9Y223 722 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 HMX2A2RU54 273 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 C1QAP02745 245 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 BPGMP07738 259 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 MYL3P08590 195 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 SAT1P21673 171 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 BCAT1P54687 386 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 PDK1Q15118 436 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 USP41Q3LFD5 358 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 RARS2Q5T160 578 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 GRAMD4Q6IC98 578 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 FRMD7Q6ZUT3 714 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ADGRF2Q8IZF7 708 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
CCDC78-210ENST00000478979 MOCOSQ96EN8 888 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 RHOBTB2Q9BYZ6 727 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 ADAMTS10Q9H324 1103 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 PLXNA1Q9UIW2 1896 aa14.39□□□□□ -0.11
CCDC78-210ENST00000478979 KANSL1LA0AUZ9 987 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 RNF103O00237 685 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 MDM4O15151 490 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 HUS1O60921 280 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 ENTPD1P49961 510 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 CDKL1Q00532 357 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 C16orf72Q14CZ0 275 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 ADRM1Q16186 407 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 DCAF4L1Q3SXM0 396 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 WSCD1Q658N2 575 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 POTEHQ6S545 545 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 ANKRD52Q8NB46 1076 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 GSDMBQ8TAX9 411 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 BRI3BPQ8WY22 251 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 TMIGD2Q96BF3 282 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 LRGUKQ96M69 825 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 EBNA1BP2Q99848 306 aaKnown RBP14.38□□□□□ -0.11
CCDC78-210ENST00000478979 TINF2Q9BSI4 451 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
CCDC78-210ENST00000478979 THAP1Q9NVV9 213 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 FAM72CH0Y354 149 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 ITM2AO43736 263 aa14.38□□□□□ -0.11
CCDC78-210ENST00000478979 GPR32O75388 356 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms