RNA–Protein interactions for RNA: ENST00000478695.1

DDX1-206, Transcript of DEAD-box helicase 1, humanhuman

TSL 4

Gene DDX1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-206ENST00000478695 CUZD1Q86UP6 607 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 FJX1Q86VR8 437 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 HORMAD2Q8N7B1 307 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 SLC35F5Q8WV83 523 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 RTP4Q96DX8 246 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 GFM1Q96RP9 751 aaKnown RBP4.79□□□□□ -1.64
DDX1-206ENST00000478695 HIPK3Q9H422 1215 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 IL21RQ9HBE5 538 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 PDE11AQ9HCR9 933 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 PKP3Q9Y446 797 aa4.79□□□□□ -1.64
DDX1-206ENST00000478695 TRBV5-7A0A0A0MS05 114 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 TCRBV7S3A2A0A539 114 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 C17orf102A2RUQ5 167 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 PARNO95453 639 aaKnown RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 MYL1P05976 194 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 FAM3BP58499 235 aaPredicted RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 SEC61A1P61619 476 aaKnown RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 RHAGQ02094 409 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 ALKBH1Q13686 389 aaKnown RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 DUSP6Q16828 381 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 SPSB3Q6PJ21 355 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 RBM23Q86U06 439 aaKnown RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 ZBTB8BQ8NAP8 495 aaPredicted RBP4.78□□□□□ -1.64
DDX1-206ENST00000478695 KDM1BQ8NB78 822 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 CLEC4CQ8WTT0 213 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 CPT1BQ92523 772 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 MECRQ9BV79 373 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 TRIM31Q9BZY9 425 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 PHTF1Q9UMS5 762 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 CNTN6Q9UQ52 1028 aa4.78□□□□□ -1.64
DDX1-206ENST00000478695 AGAP5A6NIR3 686 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 EYA2O00167 538 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 LINC01565O15544 149 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 MMP3P08254 477 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 ITGA2BP08514 1039 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 ABCB4P21439 1286 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 ABATP80404 500 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 TRAF1Q13077 416 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 BTBD16Q32M84 506 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 KRTAP27-1Q3LI81 207 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 HSP90AB2PQ58FF8 381 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 RAB11FIP2Q7L804 512 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 FAM186BQ8IYM0 893 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 LMO3Q8TAP4 145 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 FAM110DQ8TAY7 271 aaPredicted RBP4.77□□□□□ -1.65
DDX1-206ENST00000478695 FAM216AQ8WUB2 273 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 NR4A3Q92570 626 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 C18orf8Q96DM3 657 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 TMEM41AQ96HV5 264 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 APOLD1Q96LR9 279 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 DUX5Q96PT3 197 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 PIGSQ96S52 555 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 IGSF9Q9P2J2 1179 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 PCDHA10Q9Y5I2 948 aa4.77□□□□□ -1.65
DDX1-206ENST00000478695 PLSCR5A0PG75 271 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 GOLGA6L3A6NEY3 463 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 HNRNPRO43390 633 aaKnown RBP4.76□□□□□ -1.65
DDX1-206ENST00000478695 KCNJ13O60928 360 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 ZNF432O94892 652 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 ENO3P13929 434 aaPredicted RBP4.76□□□□□ -1.65
DDX1-206ENST00000478695 CLCNKBP51801 687 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 NUDT6P53370 316 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 CDH12P55289 794 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 SLC39A14Q15043 492 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 TMEM268Q5VZI3 342 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 NFRKBQ6P4R8 1299 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 Q6ZSV7 163 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 USP43Q70EL4 1123 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
DDX1-206ENST00000478695 ZNF367Q7RTV3 350 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 SRLQ86TD4 932 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 NPAS1Q99742 590 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.76□□□□□ -1.65
DDX1-206ENST00000478695 KLHL31Q9H511 634 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 TMLHEQ9NVH6 421 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 ZDHHC7Q9NXF8 308 aa4.76□□□□□ -1.65
DDX1-206ENST00000478695 FFAR2O15552 330 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 RNMTO43148 476 aaKnown RBP4.75□□□□□ -1.65
DDX1-206ENST00000478695 UNGP13051 313 aaPredicted RBP4.75□□□□□ -1.65
DDX1-206ENST00000478695 NAGAP17050 411 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 RFC1P35251 1148 aaPredicted RBP4.75□□□□□ -1.65
DDX1-206ENST00000478695 GNALP38405 381 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 AMTP48728 403 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 CDK7P50613 346 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 TRIM60Q495X7 471 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 GXYLT1Q4G148 440 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 NCAPH2Q6IBW4 605 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 PGBD2Q6P3X8 592 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 ZDHHC23Q8IYP9 409 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 CEP76Q8TAP6 659 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 FAM71BQ8TC56 605 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 ADAMTS14Q8WXS8 1223 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 KCNJ9Q92806 393 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 FRG2BQ96QU4 278 aa4.75□□□□□ -1.65
DDX1-206ENST00000478695 CADM1Q9BY67 442 aaKnown RBP4.75□□□□□ -1.65
DDX1-206ENST00000478695 RETREG1Q9H6L5 497 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms