RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	LBHD1	Q9BQE6	289 aa	Predicted RBP	4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	CCSER1	Q9C0I3	900 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	TMX1	Q9H3N1	280 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	IFT122	Q9HBG6	1241 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	EMC7	Q9NPA0	242 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	ANKEF1	Q9NU02	776 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	BLOC1S4	Q9NUP1	217 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	TMEM140	Q9NV12	185 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	ADAM21	Q9UKJ8	722 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	RCOR1	Q9UKL0	485 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	SRPRB	Q9Y5M8	271 aa	Known RBP	4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	EYS	Q5T1H1	3165 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	RALGAPA2	Q2PPJ7	1873 aa		4.41	□□□□□ -1.7
RPS27A-208	ENST00000478196	TDRD15	B5MCY1	1934 aa	Known RBP	4.4	□□□□□ -1.7
RPS27A-208	ENST00000478196		A0A1W2PPC1	479 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SPTLC2	O15270	562 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	MGEA5	O60502	916 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PPP6R2	O75170	966 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CSDE1	O75534	798 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PARN	O95453	639 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	EYA4	O95677	639 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	GHR	P10912	638 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CYP11B2	P19099	503 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	GLRA2	P23416	452 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CD52	P31358	61 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CCT6A	P40227	531 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	GPC3	P51654	580 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SLC12A3	P55017	1021 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	NLRP11	P59045	1033 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	WDR5	P61964	334 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	DEFB103A	P81534	67 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TFF2	Q03403	129 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	EMC2	Q15006	297 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PDCD1	Q15116	288 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TCEA2	Q15560	299 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TMEM266	Q2M3C6	531 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	LRIT3	Q3SXY7	679 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SPECC1	Q5M775	1068 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	KRT79	Q5XKE5	535 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ATL3	Q6DD88	541 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SHC4	Q6S5L8	630 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.4	□□□□□ -1.71	1e-17	■■■■■ 167.6
RPS27A-208	ENST00000478196	C1orf186	Q6ZWK4	172 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	OTUD6A	Q7L8S5	288 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TDH	Q8IZJ6	230 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	METTL13	Q8N6R0	699 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TOR1AIP2	Q8NFQ8	470 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	DBF4B	Q8NFT6	615 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ERMN	Q8TAM6	284 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	DENND1A	Q8TEH3	1009 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PRPF31	Q8WWY3	499 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TNPO1	Q92973	898 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	FATE1	Q969F0	183 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ZNF668	Q96K58	619 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	CEP170P1	Q96L14	293 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ACAP3	Q96P50	834 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PLIN2	Q99541	437 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	MYOC	Q99972	504 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	MINDY3	Q9H8M7	445 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	POLD4	Q9HCU8	107 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ERVK-5	Q9HDB9	667 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	DDX19A	Q9NUU7	478 aa	Known RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SUCLA2	Q9P2R7	463 aa	Predicted RBP	4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TCEAL9	Q9UHQ7	104 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PADI4	Q9UM07	663 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PCDHA7	Q9UN72	937 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	EDAR	Q9UNE0	448 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	ST3GAL5	Q9UNP4	418 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	TRPV2	Q9Y5S1	764 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	SQOR	Q9Y6N5	450 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196		A0A0C4DFX4	3053 aa		4.4	□□□□□ -1.71
RPS27A-208	ENST00000478196	PLXNA4	Q9HCM2	1894 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196		A0A087WZ62	844 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	PRAMEF33	A0A0G2JMD5	474 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	FAM237A	A0A1B0GTK4	181 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	LINC00473	A8K010	186 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	ENPP3	O14638	875 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	USO1	O60763	962 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	PRAMEF10	O60809	474 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	DKC1	O60832	514 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	NTN1	O95631	604 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	FGB	P02675	491 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	EDN1	P05305	212 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	RPLP2	P05387	115 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	DARS	P14868	501 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	TKT	P29401	623 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	HOXA11	P31270	313 aa	Predicted RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	FXR1	P51114	621 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	CRYBB1	P53674	252 aa	Predicted RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	PTEN	P60484	403 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	RPS7	P62081	194 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	POU5F1B	Q06416	359 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	LAMTOR4	Q0VGL1	99 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	CAPS	Q13938	189 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	KARS	Q15046	597 aa	Known RBP	4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	STK38	Q15208	465 aa		4.39	□□□□□ -1.71
RPS27A-208	ENST00000478196	RESP18	Q5W5W9	173 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms