RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 MYH15Q9Y2K3 1946 aa5.01□□□□□ -1.61
LMBR1-216ENST00000477983 MAP3K15Q6ZN16 1313 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 VSTM5A8MXK1 200 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 PARNO95453 639 aaKnown RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 TOMM40O96008 361 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ALPLP05186 524 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 H2AFXP16104 143 aaPredicted RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 ADRA1DP25100 572 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 U2AF2P26368 475 aaKnown RBP eCLIP5□□□□□ -1.617e-6■■□□□ 14.4
LMBR1-216ENST00000477983 PEX2P28328 305 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 NTSR1P30989 418 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 SLC14A1Q13336 389 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ITPK1Q13572 414 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 KCNAB1Q14722 419 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 MFSD13AQ14CX5 517 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 HLFQ16534 295 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ST3GAL2Q16842 350 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ADALQ6DHV7 355 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 C14orf80Q86SX3 495 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 PIM3Q86V86 326 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 SPC24Q8NBT2 197 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 CCDC191Q8NCU4 936 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 KCNG4Q8TDN1 519 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 IPCEF1Q8WWN9 437 aaPredicted RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 GTF3C6Q969F1 213 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ZNF274Q96GC6 653 aaPredicted RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 LYZL4Q96KX0 146 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 C16orf45Q96MC5 204 aaPredicted RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 NEK1Q96PY6 1258 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 HIST1H2AAQ96QV6 131 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 MPHOSPH8Q99549 860 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 ISCA1Q9BUE6 129 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 AGXT2Q9BYV1 514 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 SIL1Q9H173 461 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 OBP2AQ9NY56 170 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 DNAJB11Q9UBS4 358 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 VPS51Q9UID3 782 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 HOOK1Q9UJC3 728 aaKnown RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 TRPC5Q9UL62 973 aaPredicted RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 CAPN11Q9UMQ6 739 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 PALLDQ8WX93 1383 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 NUP188Q5SRE5 1749 aa5□□□□□ -1.61
LMBR1-216ENST00000477983 TNKS1BP1Q9C0C2 1729 aaKnown RBP5□□□□□ -1.61
LMBR1-216ENST00000477983 WDR19Q8NEZ3 1342 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CCDC187A0A096LP49 1063 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 TULP2O00295 520 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 SNX2O60749 519 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 PFKFB2O60825 505 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 YEATS4O95619 227 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 PSG1P11464 419 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 GPTP24298 496 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 IL6STP40189 918 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CRKLP46109 303 aaKnown RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 RFX5P48382 616 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 EVCP57679 992 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 RABL6Q3YEC7 729 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 HSP90AB3PQ58FF7 597 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CCDC158Q5M9N0 1113 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 PPP4R4Q6NUP7 873 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 MZT2AQ6P582 158 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 TMCO3Q6UWJ1 677 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CLEC9AQ6UXN8 241 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 AACSQ86V21 672 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 LUZP1Q86V48 1076 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 FMNL3Q8IVF7 1028 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CCAR1Q8IX12 1150 aaKnown RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 ZNF548Q8NEK5 533 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 ADAMTS15Q8TE58 950 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 ZDHHC12Q96GR4 267 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CCDC34Q96HJ3 373 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 HIC2Q96JB3 615 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 VPS50Q96JG6 964 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 ZCWPW1Q9H0M4 648 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 HELLSQ9NRZ9 838 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 ZHX1Q9UKY1 873 aaPredicted RBP4.99□□□□□ -1.61
LMBR1-216ENST00000477983 SLC27A6Q9Y2P4 619 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 TJP1Q07157 1748 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 MED23Q9ULK4 1368 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 SPEF2Q9C093 1822 aa4.99□□□□□ -1.61
LMBR1-216ENST00000477983 CCDC69A6NI79 296 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 FAM90A8PA6NJQ4 464 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 ERVV-1B6SEH8 477 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 AP5Z1O43299 807 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 CRYABP02511 175 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 MT-ND5P03915 603 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 PCCAP05165 728 aaPredicted RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 IVLP07476 585 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 FAM90A13PP0C7W8 464 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 FAM90A24PP0C7X0 464 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 MCM3P25205 808 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 RBL1P28749 1068 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 TACR3P29371 465 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 COPAP53621 1224 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 EIF5P55010 431 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 NANOS2P60321 138 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 GPC5P78333 572 aa4.98□□□□□ -1.61
LMBR1-216ENST00000477983 TXNL4AP83876 142 aaKnown RBP4.98□□□□□ -1.61
LMBR1-216ENST00000477983 CCZ1BP86790 482 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms