RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KIAA0408Q6ZU52 694 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 NEK8Q86SG6 692 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 DPP9Q86TI2 863 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 CCDC28AQ8IWP9 274 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 TBC1D22AQ8WUA7 517 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 TEKT1Q969V4 418 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 RIPOR3Q96MK2 946 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 HS6ST2Q96MM7 605 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 MORF4L1Q9UBU8 362 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 MAN2B2Q9Y2E5 1009 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 CACNA1IQ9P0X4 2223 aa5.28□□□□□ -1.56
VPS50-214ENST00000477935 UTYO14607 1347 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 WDFY4Q6ZS81 3184 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 KBTBD13C9JR72 458 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 H3BNC9 293 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 CCNT2O60583 730 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 NDST3O95803 873 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 CLTBP09497 229 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 HARSP12081 509 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 ATF7P17544 494 aaPredicted RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 NEK3P51956 506 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 AK2P54819 239 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 GPC5P78333 572 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 TXNL4AP83876 142 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 TLE2Q04725 743 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 CHRNDQ07001 517 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 MTAPQ13126 283 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 LARS2Q15031 903 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 ACOX1Q15067 660 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 AWAT1Q58HT5 328 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 TMEM63BQ5T3F8 832 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 CCSAPQ6IQ19 270 aaPredicted RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 GRHL2Q6ISB3 625 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 DCDC5Q6ZRR9 648 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 YTHDF3Q7Z739 585 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 P3H2Q8IVL5 708 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 SCYL3Q8IZE3 742 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 TXLNBQ8N3L3 684 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 OR2C3Q8N628 320 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 C12orf76Q8N812 135 aaPredicted RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 GPRC5AQ8NFJ5 357 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 ABHD5Q8WTS1 349 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 USP6NLQ92738 828 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 WDR24Q96S15 920 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 QTRT1Q9BXR0 403 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 CHMP4AQ9BY43 222 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 MTIF3Q9H2K0 278 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 PDGFCQ9NRA1 345 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 GAR1Q9NY12 217 aaKnown RBP5.27□□□□□ -1.57
VPS50-214ENST00000477935 TMOD4Q9NZQ9 345 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 PHTF1Q9UMS5 762 aa5.27□□□□□ -1.57
VPS50-214ENST00000477935 OTOFQ9HC10 1997 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 TCF20Q9UGU0 1960 aaKnown RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 TMEM232C9JQI7 657 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 CBFA2T3O75081 653 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 FGF18O76093 207 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 CDK4P11802 303 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 IDEP14735 1019 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 EGR1P18146 543 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 KELP23276 732 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 SLC5A2P31639 672 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 PPIGQ13427 754 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-214ENST00000477935 PICALMQ13492 652 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 MFSD13AQ14CX5 517 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 SLC35G1Q2M3R5 365 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 MTX3Q5HYI7 312 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 CCDC181Q5TID7 509 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 RAP1GAP2Q684P5 730 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 SLC18B1Q6NT16 456 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 APOBEC3HQ6NTF7 200 aaKnown RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 PSRC1Q6PGN9 363 aaPredicted RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 GALNT16Q8N428 558 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.26□□□□□ -1.57
VPS50-214ENST00000477935 FAM71DQ8N9W8 422 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 GLIS1Q8NBF1 620 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 SLC44A5Q8NCS7 719 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 EDC3Q96F86 508 aaKnown RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 KAZALD1Q96I82 304 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 EFHD1Q9BUP0 239 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 EIF2AQ9BY44 585 aaKnown RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 PCGF6Q9BYE7 350 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 PCDHAC1Q9H158 963 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 USP29Q9HBJ7 922 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 NRIP3Q9NQ35 241 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 VPS45Q9NRW7 570 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 LRRFIP2Q9Y608 721 aaKnown RBP5.26□□□□□ -1.57
VPS50-214ENST00000477935 COL4A1P02462 1669 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 MGAMO43451 1857 aa5.26□□□□□ -1.57
VPS50-214ENST00000477935 ATRXP46100 2492 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 RIF1Q5UIP0 2472 aaKnown RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 C5orf42Q9H799 3197 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 DOCK3Q8IZD9 2030 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 BAHCC1Q9P281 2608 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 TPRP12270 2363 aaKnown RBP5.25□□□□□ -1.57
VPS50-214ENST00000477935 SMIM35A0A1B0GVV1 85 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 WDR91A4D1P6 747 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 CLIC1O00299 241 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 DCXO43602 365 aa5.25□□□□□ -1.57
VPS50-214ENST00000477935 PRAMEF2O60811 474 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms