RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ZNF304Q9HCX3 659 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 GGA3Q9NZ52 723 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 MSRB1Q9NZV6 116 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 HEY2Q9UBP5 337 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 COG5Q9UP83 839 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.63□□□□□ -1.83
TARDBP-208ENST00000477447 TTBK1Q5TCY1 1321 aaPredicted RBP3.63□□□□□ -1.83
TARDBP-208ENST00000477447 A0A0G2JK05 382 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM247A6NEH6 219 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 A6NNC1 897 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 DHX16O60231 1041 aaKnown RBP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 HLA-DQA2P01906 255 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 PYGLP06737 847 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 CHRNB1P11230 501 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 CDK4P11802 303 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 FCGR2AP12318 317 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 PRF1P14222 555 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 CD72P21854 359 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 SKIV2L2P42285 1042 aaKnown RBP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 PLCD1P51178 756 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 CHRNDQ07001 517 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 TRPC3Q13507 836 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 INPP5JQ15735 1006 aaPredicted RBP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 SH2D4BQ5SQS7 431 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 BBS12Q6ZW61 710 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 IGFN1Q86VF2 1251 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 MAELQ96JY0 434 aaKnown RBP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 ZFYVE19Q96K21 471 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF778Q96MU6 729 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 FRG2BQ96QU4 278 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 WDR83Q9BRX9 315 aaKnown RBP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 TRMOQ9BU70 441 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 GPR63Q9BZJ6 419 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.62□□□□□ -1.83
TARDBP-208ENST00000477447 HIPK3Q9H422 1215 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 SPAG4Q9NPE6 437 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 ELOVL5Q9NYP7 299 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 RNF7Q9UBF6 113 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 CD207Q9UJ71 328 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 HSF4Q9ULV5 492 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 ICKQ9UPZ9 632 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 DHDHQ9UQ10 334 aa3.62□□□□□ -1.83
TARDBP-208ENST00000477447 A0A0A0MQY5 61 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TLX3O43711 291 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 DDAH2O95865 285 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 AGR2O95994 175 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 LCKP06239 509 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 HNRNPA1P09651 372 aaKnown RBP eCLIP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 PRKCHP24723 683 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 HNF1BP35680 557 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 GJC1P36383 396 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 PTPN9P43378 593 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 MTNR1AP48039 350 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TLE2Q04725 743 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TDGQ13569 410 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 PIK3CD-AS1Q5SR53 167 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 VWA5B1Q5TIE3 1220 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 AADACL2Q6P093 401 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 AAGABQ6PD74 315 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 GJB7Q6PEY0 223 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 KDELC2Q7Z4H8 507 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 MRPL10Q7Z7H8 261 aaKnown RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 PIP4P1Q86T03 277 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 GHDCQ8N2G8 530 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 SLC25A41Q8N5S1 370 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 DPP10Q8N608 796 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 ARFGAP1Q8N6T3 406 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 NRACQ8N912 160 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 LRRC57Q8N9N7 239 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF548Q8NEK5 533 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 CMASQ8NFW8 434 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 FAR1Q8WVX9 515 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 CENPIQ92674 756 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 NPLQ9BXD5 320 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TTC12Q9H892 705 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM160Q9NX00 188 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 ALKBH4Q9NXW9 302 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 C9orf78Q9NZ63 289 aaPredicted RBP3.61□□□□□ -1.83
TARDBP-208ENST00000477447 HDAC6Q9UBN7 1215 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 AFG3L2Q9Y4W6 797 aa3.61□□□□□ -1.83
TARDBP-208ENST00000477447 OR6C68A6NDL8 312 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SH2D7A6NKC9 451 aaPredicted RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF814B7Z6K7 855 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SOCS2O14508 198 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 PPEF2O14830 753 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ZC3H11AO75152 810 aaKnown RBP eCLIP3.6□□□□□ -1.831e-7■■□□□ 12
TARDBP-208ENST00000477447 TMCC1O94876 653 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 NDUFB8O95169 186 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SLC16A2P36021 539 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 PGM1P36871 562 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ME1P48163 572 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 TMPRSS3P57727 454 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 SRSF1Q07955 248 aaKnown RBP eCLIP3.6□□□□□ -1.834e-7■■□□□ 11.7
TARDBP-208ENST00000477447 TBL3Q12788 808 aaKnown RBP3.6□□□□□ -1.83
TARDBP-208ENST00000477447 NAA25Q14CX7 972 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 PLK5Q496M5 336 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 ALFQ53S48 1182 aa3.6□□□□□ -1.83
TARDBP-208ENST00000477447 WDR45BQ5MNZ6 344 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms