RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CAMK2BQ13554 666 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SLC12A1Q13621 1099 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 RAPGEF1Q13905 1077 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 RAB6CQ53S08 254 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 AGBL4Q5VU57 503 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 TFAP2DQ7Z6R9 452 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PHLDB2Q86SQ0 1253 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 CHST14Q8NCH0 376 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PIP4K2CQ8TBX8 421 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SAP25Q8TEE9 199 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
VARS2-208ENST00000477052 SPAG5Q96R06 1193 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 TBCBQ99426 244 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PSMB7Q99436 277 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 TKTL2Q9H0I9 626 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 RAB6CQ9H0N0 254 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 TNKS2Q9H2K2 1166 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 FZD3Q9NPG1 666 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 GDF3Q9NR23 364 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 ASNSD1Q9NWL6 643 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 SLC25A13Q9UJS0 675 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 PPM1HQ9ULR3 514 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 FHOD1Q9Y613 1164 aa11.98□□□□□ -0.49
VARS2-208ENST00000477052 A0A0D9SEW6 157 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 PES1O00541 588 aaKnown RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 SLC31A1O15431 190 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 ATP9BO43861 1147 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 LDOC1O95751 146 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 SRCP12931 536 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 PRKCSHP14314 528 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 EPHA8P29322 1005 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 NOS2P35228 1153 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 TAS2R38P59533 333 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 UBE2HP62256 183 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 SULT2A1Q06520 285 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 SFSWAPQ12872 951 aaKnown RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 DRAP1Q14919 205 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 DPCR1Q3MIW9 517 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 MIIPQ5JXC2 388 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 FAM102AQ5T9C2 384 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 TTC39BQ5VTQ0 682 aaPredicted RBP11.97□□□□□ -0.49
VARS2-208ENST00000477052 TRNP1Q6NT89 227 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 SLC26A9Q7LBE3 791 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 FAM71AQ8IYT1 594 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 SH2D3CQ8N5H7 860 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 ATP11CQ8NB49 1132 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 OR7D4Q8NG98 312 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 ARRDC3Q96B67 414 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 LRIG1Q96JA1 1093 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 NOX5Q96PH1 765 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 NPY6RQ99463 290 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 WDCPQ9H6R7 721 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.97□□□□□ -0.49
VARS2-208ENST00000477052 ACTL7AQ9Y615 435 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 ATRXP46100 2492 aa11.97□□□□□ -0.49
VARS2-208ENST00000477052 ACACAQ13085 2346 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 GTPBP10A4D1E9 387 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 KPNA3O00505 521 aaPredicted RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 LATO43561 262 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 PLRG1O43660 514 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 SRGAP2O75044 1071 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 CLDN11O75508 207 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 RHOCP08134 193 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 FLT3P36888 993 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 CXCR3P49682 368 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 DEUP1Q05D60 604 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 SMAD1Q15797 465 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 MAN2A1Q16706 1144 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 VWA3BQ502W6 1294 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 ARTNQ5T4W7 220 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 NAPEPLDQ6IQ20 393 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 NOP9Q86U38 636 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 PRPF39Q86UA1 669 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 PDZD3Q86UT5 571 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 GRIN3AQ8TCU5 1115 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 CPA5Q8WXQ8 436 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 SKA1Q96BD8 255 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 NDST4Q9H3R1 872 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 SAMSN1Q9NSI8 373 aaKnown RBP11.96□□□□□ -0.49
VARS2-208ENST00000477052 CHMP5Q9NZZ3 219 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 VPS51Q9UID3 782 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D30Q9Y2I9 924 aa11.96□□□□□ -0.49
VARS2-208ENST00000477052 A0A1W2PQU0 124 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 MCF2LO15068 1137 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 DFNA5O60443 496 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 GJB6O95452 261 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 MMEP08473 750 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 MYF5P13349 255 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 JUPP14923 745 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 CYP11B1P15538 503 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 CHRNA3P32297 505 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 ACADVLP49748 655 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 KLK7P49862 253 aa11.95□□□□□ -0.5
VARS2-208ENST00000477052 CDH4P55283 916 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms