RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 TCTN1Q2MV58 587 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ANKRD20A4Q4UJ75 823 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 FAM171BQ6P995 826 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ZCCHC23Q6ZST2 131 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.79■□□□□ 0.28
TMEM53-208ENST00000476724 NPWQ8N729 165 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 TEKT5Q96M29 485 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 CCDC106Q9BWC9 280 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 IL22Q9GZX6 179 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 OSBPL2Q9H1P3 480 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 C1orf21Q9H246 121 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ARMCX1Q9P291 453 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 SLC17A6Q9P2U8 582 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 COPG2Q9UBF2 871 aa16.79■□□□□ 0.28
TMEM53-208ENST00000476724 ZCWPW2A0A1B0GU75 182 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 SPECC1L-ADORA2AF8WAN1 911 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 DDHD2O94830 711 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 TOP3BO95985 862 aaKnown RBP16.78■□□□□ 0.28
TMEM53-208ENST00000476724 CYP11A1P05108 521 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 MYL4P12829 197 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 CD68P34810 354 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-208ENST00000476724 HADHAP40939 763 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 RAP1GDS1P52306 607 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 CACNA2D1P54289 1103 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 CSE1LP55060 971 aaKnown RBP16.78■□□□□ 0.28
TMEM53-208ENST00000476724 DNAL1Q4LDG9 190 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 NAPEPLDQ6IQ20 393 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 LINC00523Q86TU6 105 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 ZNF280BQ86YH2 543 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 DBF4BQ8NFT6 615 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 TTC8Q8TAM2 541 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 SNX15Q9NRS6 342 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 TMEM30AQ9NV96 361 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 STOML1Q9UBI4 398 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 MARCOQ9UEW3 520 aaPredicted RBP16.78■□□□□ 0.28
TMEM53-208ENST00000476724 DSEQ9UL01 958 aa16.78■□□□□ 0.28
TMEM53-208ENST00000476724 TIMM44O43615 452 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 LRIG2O94898 1065 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 KLHL2O95198 593 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 PGM1P36871 562 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 RABGGTBP53611 331 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 FAM189BP81408 668 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 CMPK2Q5EBM0 449 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 STRA8Q7Z7C7 330 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 TREML1Q86YW5 311 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 DCLK2Q8N568 766 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 MYLPFQ96A32 169 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 TSGA13Q96PP4 275 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 RTP3Q9BQQ7 232 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 GEMIN8Q9NWZ8 242 aaKnown RBP16.77■□□□□ 0.28
TMEM53-208ENST00000476724 NSMCE4AQ9NXX6 385 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 TMEM216Q9P0N5 145 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 APOBEC2Q9Y235 224 aaKnown RBP16.77■□□□□ 0.28
TMEM53-208ENST00000476724 DNAJC16Q9Y2G8 782 aa16.77■□□□□ 0.28
TMEM53-208ENST00000476724 COL4A4P53420 1690 aaPredicted RBP16.77■□□□□ 0.28
TMEM53-208ENST00000476724 ARHGAP42A6NI28 874 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 INPPL1O15357 1258 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 LUC7L3O95232 432 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 EOMESO95936 686 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 ENO1P06733 434 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 CPA3P15088 417 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 AOC1P19801 751 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 KCNA4P22459 653 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 HTR7P34969 479 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 MNX1P50219 401 aaPredicted RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 CLNS1AP54105 237 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 MAPRE1Q15691 268 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 KHDC1Q4VXA5 237 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 CES3Q6UWW8 571 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 C10orf107Q8IVU9 208 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 KLHDC8BQ8IXV7 354 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 SREK1Q8WXA9 508 aaKnown RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 EDEM1Q92611 657 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 ZNF570Q96NI8 536 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 MLPHQ9BV36 600 aaPredicted RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 CXorf56Q9H5V9 222 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 DMAP1Q9NPF5 467 aaPredicted RBP16.77■□□□□ 0.27
TMEM53-208ENST00000476724 DNAJC28Q9NX36 388 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 WBP1LQ9NX94 342 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 SOX13Q9UN79 622 aa16.77■□□□□ 0.27
TMEM53-208ENST00000476724 ARHGEF37A1IGU5 675 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 F8W8V4 182 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 ITM2AO43736 263 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 AMHP03971 560 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 PRKCGP05129 697 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 RALBP11234 206 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 NFKB1P19838 968 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 HARS2P49590 506 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 CDH17Q12864 832 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 BFSP2Q13515 415 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 TAF11Q15544 211 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 FSTL4Q6MZW2 842 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 DPF3Q92784 378 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 RNF34Q969K3 372 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 SCLYQ96I15 445 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 AAR2Q9Y312 384 aaKnown RBP16.76■□□□□ 0.27
TMEM53-208ENST00000476724 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
TMEM53-208ENST00000476724 CACNG3O60359 315 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms