RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 F8A1P23610 371 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MAOBP27338 520 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RBL1P28749 1068 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TTKP33981 857 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 IL6STP40189 918 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 MTIF2P46199 727 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 SOX9P48436 509 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ARFIP1P53367 373 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 AIF1P55008 147 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 HADHBP55084 474 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 CASP7P55210 303 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 IL9RQ01113 521 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 UBE3AQ05086 875 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GRSF1Q12849 480 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD55-208ENST00000476590 SLC39A6Q13433 755 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TOP3AQ13472 1001 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 NAB1Q13506 487 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 AUHQ13825 339 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 ADGRE1Q14246 886 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ERV3-1Q14264 604 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 KRT32Q14532 448 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SLC39A14Q15043 492 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 KRT31Q15323 416 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SPATS1Q496A3 300 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZBED5Q49AG3 693 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 OXLD1Q5BKU9 147 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RILPL1Q5EBL4 403 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PERM1Q5SV97 790 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD55-208ENST00000476590 KLHDC7AQ5VTJ3 777 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RSBN1Q5VWQ0 802 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 SYCE2Q6PIF2 218 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PLEKHM3Q6ZWE6 761 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 FKBP9P1Q75LS8 142 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TLK2Q86UE8 772 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 COLGALT2Q8IYK4 626 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MICU2Q8IYU8 434 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TBC1D21Q8IYX1 336 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZNF34Q8IZ26 560 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TBC1D19Q8N5T2 526 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 C10orf82Q8WW14 230 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 AKAP1Q92667 903 aaKnown RBP eCLIP4.23□□□□□ -1.73
CD55-208ENST00000476590 C18orf8Q96DM3 657 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TWNKQ96RR1 684 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RMDN3Q96TC7 470 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 KATNAL1Q9BW62 490 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SLC2A11Q9BYW1 496 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TNKS2Q9H2K2 1166 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 NCOR1P1Q9H4R4 102 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SUV39H2Q9H5I1 410 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MLXIPQ9HAP2 919 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CPNE5Q9HCH3 593 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 POLR3BQ9NW08 1133 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 NKIRAS1Q9NYS0 192 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 HMG20BQ9P0W2 317 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GIMAP2Q9UG22 337 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 FETUBQ9UGM5 382 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ERVK-19Q9WJR5 959 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GPR52Q9Y2T5 361 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DTNAQ9Y4J8 743 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 AP4S1Q9Y587 144 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GMPPBQ9Y5P6 360 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CORINQ9Y5Q5 1042 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CLUHO75153 1309 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ADGRA3Q8IWK6 1321 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TOPBP1Q92547 1522 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 TTC37Q6PGP7 1564 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 FAM170AA1A519 330 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 F8W036 122 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 EYA2O00167 538 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 GNB5O14775 395 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 TSPAN4O14817 238 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 GIPC1O14908 333 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 TM9SF1O15321 606 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 DAPK3O43293 454 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 NDUFS6O75380 124 aaKnown RBP4.22□□□□□ -1.73
CD55-208ENST00000476590 TM7SF2O76062 418 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 GLAP06280 429 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 C8AP07357 584 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 ACTN1P12814 892 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 RAG1P15918 1043 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 ALOX12P18054 663 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 CCNA2P20248 432 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 ACSL1P33121 698 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 HPCAL1P37235 193 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 GARSP41250 739 aaKnown RBP4.22□□□□□ -1.73
CD55-208ENST00000476590 PCP4P48539 62 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 HOXA1P49639 335 aaPredicted RBP4.22□□□□□ -1.73
CD55-208ENST00000476590 STARP49675 285 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 GPLD1P80108 840 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 CYP4F8P98187 520 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 CACNB2Q08289 660 aaPredicted RBP4.22□□□□□ -1.73
CD55-208ENST00000476590 BAMBIQ13145 260 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 IDI1Q13907 227 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 CCNG2Q16589 344 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 UGP2Q16851 508 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 LRRC36Q1X8D7 754 aa4.22□□□□□ -1.73
CD55-208ENST00000476590 MTHFSDQ2M296 383 aaKnown RBP4.22□□□□□ -1.73
CD55-208ENST00000476590 INAVAQ3KP66 663 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms