RNA–Protein interactions for RNA: ENST00000476098.5

BEST3-204, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 1,692 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-204ENST00000476098 IFNB1P01574 187 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 RHOXF2BP0C7M4 288 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ZSCAN5DPP0CG00 497 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 GLDCP23378 1020 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ETFBP38117 255 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 CLCN6P51797 869 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 OXCT1P55809 520 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 WASHC5Q12768 1159 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
BEST3-204ENST00000476098 AAK1Q2M2I8 961 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ERCC6LQ2NKX8 1250 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
BEST3-204ENST00000476098 IL31Q6EBC2 164 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 SYDE1Q6ZW31 735 aaPredicted RBP11.9□□□□□ -0.5
BEST3-204ENST00000476098 ZNF354CQ86Y25 554 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ETFBKMTQ8IXQ9 262 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 MYRIPQ8NFW9 859 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 UBXN4Q92575 508 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 RHOXF2Q9BQY4 288 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 SLC2A11Q9BYW1 496 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 EPC1Q9H2F5 836 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 KCNK12Q9HB15 430 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 PDFQ9HBH1 243 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ATP13A1Q9HD20 1204 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 ABCB8Q9NUT2 735 aa11.9□□□□□ -0.5
BEST3-204ENST00000476098 INTS6Q9UL03 887 aaKnown RBP11.9□□□□□ -0.5
BEST3-204ENST00000476098 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 C5orf60A6NFR6 353 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 MTSS1O43312 755 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 GCATO75600 419 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 ZNF189O75820 626 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 ZMPSTE24O75844 475 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 KRT14P02533 472 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 CISD3P0C7P0 127 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 CCNB1P14635 433 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 IL9P15248 144 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 PLK1P53350 603 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 IL10RBQ08334 325 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 ZBTB17Q13105 803 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 NR1H3Q13133 447 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 SLC12A1Q13621 1099 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 PTK6Q13882 451 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 NAA30Q147X3 362 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 TIGD7Q6NT04 549 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 SLC44A3Q8N4M1 653 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 CPA6Q8N4T0 437 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 CCDC89Q8N998 374 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 TTC8Q8TAM2 541 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 MAML1Q92585 1016 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 NXPE3Q969Y0 559 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 ZNF419Q96HQ0 510 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 XPO6Q96QU8 1125 aaKnown RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 ERP44Q9BS26 406 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 CEP41Q9BYV8 373 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 BRD9Q9H8M2 597 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 SP110Q9HB58 689 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 PCDH9Q9HC56 1237 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 SEPT10Q9P0V9 454 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
BEST3-204ENST00000476098 NUP210Q8TEM1 1887 aaPredicted RBP11.89□□□□□ -0.51
BEST3-204ENST00000476098 DENND4AQ7Z401 1863 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 ZSCAN5CA6NGD5 496 aaPredicted RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 BHMG1C9JSJ3 638 aaPredicted RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 RNF103O00237 685 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 CBX4O00257 560 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 CTIFO43310 598 aaKnown RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 SNAP91O60641 907 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 TULP3O75386 442 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 HEXIM1O94992 359 aaKnown RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 JCHAINP01591 159 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 PTPN3P26045 913 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 GJA4P35212 333 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 RPL22P35268 128 aaKnown RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 SLC6A11P48066 632 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 IFI35P80217 286 aaPredicted RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 ARF5P84085 180 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 P3H1Q32P28 736 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 TEX44Q53QW1 395 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 DUPD1Q68J44 220 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 LEKR1Q6ZMV7 388 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.88□□□□□ -0.51
BEST3-204ENST00000476098 DCAF4L2Q8NA75 395 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 CCDC110Q8TBZ0 833 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 CHFRQ96EP1 664 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 IL12RB2Q99665 862 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 FERMT1Q9BQL6 677 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 ANKZF1Q9H8Y5 726 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 DNAJC17Q9NVM6 304 aaKnown RBP11.88□□□□□ -0.51
BEST3-204ENST00000476098 IGSF9Q9P2J2 1179 aa11.88□□□□□ -0.51
BEST3-204ENST00000476098 GGA2Q9UJY4 613 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms