RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CLDN5O00501 218 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 FCHO1O14526 889 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CXCL11O14625 94 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 RPLP2P05387 115 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 MYL12AP19105 171 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 MAGEA10P43363 369 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 TUFMP49411 452 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ZNF618Q5T7W0 954 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 WDR59Q6PJI9 974 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 DCUN1D5Q9BTE7 237 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ASB7Q9H672 318 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ABCC13Q9NSE7 274 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 GPSM3Q9Y4H4 160 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ANKDD1BA6NHY2 528 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 KLHL18O94889 574 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 PROCP04070 461 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 PIRTP0C851 137 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ABL2P42684 1182 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ZNF57Q68EA5 555 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ALKBH2Q6NS38 261 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 NETO2Q8NC67 525 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 OXNAD1Q96HP4 312 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 APOPT1Q96IL0 206 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 DUSP9Q99956 384 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 MIR1-1HGQ9H1L0 117 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SOHLH2Q9NX45 425 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ENTPD4Q9Y227 616 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 OR6A2O95222 327 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CRATP43155 626 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 HK2P52789 917 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CRY1Q16526 586 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 AP5B1Q2VPB7 878 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 PREPLQ4J6C6 727 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 SLC44A4Q53GD3 710 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 KCNK18Q7Z418 384 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ZNF410Q86VK4 478 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SNX32Q86XE0 403 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 COLGALT2Q8IYK4 626 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 BTBD10Q9BSF8 475 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 VTI1BQ9UEU0 232 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 MCM8Q9UJA3 840 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CBX6O95503 412 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ATP6V1G2O95670 118 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 LGALS2P05162 132 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 KDELR1P24390 212 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ST13P50502 369 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ATP1A4Q13733 1029 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 IKBKEQ14164 716 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CACTIN-AS1Q8N1I8 211 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SOCS4Q8WXH5 440 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 PANX3Q96QZ0 392 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SLC4A5Q9BY07 1137 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ASB8Q9H765 288 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 FBXO6Q9NRD1 293 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 KLHL3Q9UH77 587 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 MEGF6O75095 1541 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 OR6B1O95007 311 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ATP5BP06576 529 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 LRPAP1P30533 357 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 S100A3P33764 101 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 POLD2P49005 469 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 IL2P60568 153 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SDHAF4Q5VUM1 108 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 RSBN1Q5VWQ0 802 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ITFG1Q8TB96 612 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CAVIN3Q969G5 261 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ADAM30Q9UKF2 790 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 FFAR3O14843 346 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 GPR42O15529 346 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 FKBP6O75344 327 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 RPN2P04844 631 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 CCDC166P0CW27 439 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TRIQKQ629K1 86 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 FBXO30Q8TB52 745 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 PROX1Q92786 737 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 EXOC2Q96KP1 924 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ZFP14Q9HCL3 533 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 MRPL17Q9NRX2 175 aaKnown RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 ETNK2Q9NVF9 386 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 DIP2BQ9P265 1576 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 A0A0B4J269 797 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 EPN2O95208 641 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 COX7A2P14406 83 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ITGAXP20702 1163 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TAF13Q15543 124 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 SCIMPQ6UWF3 145 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 FAM183BPQ6ZVS7 135 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 FAM126AQ9BYI3 521 aaPredicted RBP11.12□□□□□ -0.63
VAPB-204ENST00000475243 L2HGDHQ9H9P8 463 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 VPS51Q9UID3 782 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 MRASO14807 208 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 TBL1XO60907 577 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 BCL10O95999 233 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 LDLRP01130 860 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 AMD1P17707 334 aa11.12□□□□□ -0.63
VAPB-204ENST00000475243 ARMC4Q5T2S8 1044 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms