RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 FUT11Q495W5 492 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 PPP6R3Q5H9R7 873 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 EFHC2Q5JST6 749 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 LRRC38Q5VT99 294 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 GRAMD4Q6IC98 578 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF852Q6ZMS4 543 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 NT5DC3Q86UY8 548 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 PSTKQ8IV42 348 aaKnown RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 APCDD1Q8J025 514 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CARNMT1Q8N4J0 409 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 FAM160A2Q8N612 972 aaPredicted RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 NPWQ8N729 165 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 PQLC3Q8N755 202 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 NETO2Q8NC67 525 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 HSPH1Q92598 858 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 ALG3Q92685 438 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 FAF2Q96CS3 445 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 MSANTD3Q96H12 275 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 MYO19Q96H55 970 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 LRIG1Q96JA1 1093 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CSPG4P5Q96PW8 444 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 ACOX2Q99424 681 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 PSMB7Q99436 277 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 DDX50Q9BQ39 737 aaKnown RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 HERPUD2Q9BSE4 406 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 FEM1AQ9BSK4 669 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CD248Q9HCU0 757 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 LUC7LQ9NQ29 371 aaKnown RBP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 ARHGEF4Q9NR80 690 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 DEC1Q9P2X7 70 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 KLK13Q9UKR3 277 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 GUCA1BQ9UMX6 200 aa7.18□□□□□ -1.26
LIMD1-204ENST00000474665 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.18□□□□□ -1.26
LIMD1-204ENST00000474665 CABIN1Q9Y6J0 2220 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 TENM4Q6N022 2769 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 WASH4PA8MWX3 477 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CHURC1-FNTBB4DL54 471 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 EEF2KO00418 725 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 FANCGO15287 622 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 SNAP91O60641 907 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ADAM23O75077 832 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CLDN11O75508 207 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ZMPSTE24O75844 475 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 FTCDO95954 541 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CD160O95971 181 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CAPNS1P04632 268 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CYBBP04839 570 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PTMAP06454 111 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ZNF806P0C7X5 589 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PABPC1P11940 636 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 AMPD1P23109 780 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 GLDCP23378 1020 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 KDELR1P24390 212 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 EPHB2P29323 1055 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 GJC1P36383 396 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CSKP41240 450 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PI4KAP42356 2102 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 SLC1A1P43005 524 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 MAGEA9P43362 315 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 HCAR3P49019 387 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 FNTBP49356 437 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PEX5P50542 639 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PLK1P53350 603 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 CDH6P55285 790 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ADCY2Q08462 1091 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PTPRNQ16849 979 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PLEKHG6Q3KR16 790 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PITRM1Q5JRX3 1037 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RABGAP1LQ5R372 815 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ACBD5Q5T8D3 534 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 DCAF12L1Q5VU92 463 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 AFMIDQ63HM1 303 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 EGFLAMQ63HQ2 1017 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RWDD4Q6NW29 188 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 MFSD7Q6UXD7 560 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 LRRC31Q6UY01 552 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RFX8Q6ZV50 586 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 MFN1Q8IWA4 741 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ARHGAP12Q8IWW6 846 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 C17orf53Q8N3J3 647 aaPredicted RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RNF10Q8N5U6 811 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 RTL3Q8N8U3 475 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 IL17RCQ8NAC3 791 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 OR7D4Q8NG98 312 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 PCDH19Q8TAB3 1148 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 USP33Q8TEY7 942 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ANP32BQ92688 251 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 TTC17Q96AE7 1141 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 VOPP1Q96AW1 172 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 TBC1D31Q96DN5 1066 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 MRGPRX3Q96LB0 322 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
LIMD1-204ENST00000474665 EPAS1Q99814 870 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 NCAPGQ9BPX3 1015 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 ZYG11BQ9C0D3 744 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 LMAN1LQ9HAT1 526 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 LZTFL1Q9NQ48 299 aa7.17□□□□□ -1.26
LIMD1-204ENST00000474665 LCMT1Q9UIC8 334 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms