RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RARAP10276 462 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 IL1R2P27930 398 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 OXTRP30559 389 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 MAN1A1P33908 653 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 GJC1P36383 396 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 P2RY2P41231 377 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 HCAR3P49019 387 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 MRE11P49959 708 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 CLCN6P51797 869 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 ZBTB16Q05516 673 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 SEMA3BQ13214 749 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 CA9Q16790 459 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 PARP15Q460N3 678 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 DAB2IPQ5VWQ8 1189 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 ZNF776Q68DI1 518 aaPredicted RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 RFX8Q6ZV50 586 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 LPCAT2Q7L5N7 544 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 METTL3Q86U44 580 aaKnown RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 ALYREFQ86V81 257 aaKnown RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 CACUL1Q86Y37 369 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 MAP7D3Q8IWC1 876 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 SH2D3CQ8N5H7 860 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 GANCQ8TET4 914 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 ARHGEF2Q92974 986 aaKnown RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 MYO19Q96H55 970 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 MKRN2Q9H000 416 aaKnown RBP14.07□□□□□ -0.16
USF1-205ENST00000473969 SLC6A17Q9H1V8 727 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 CYP8B1Q9UNU6 501 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 HS3ST2Q9Y278 367 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 NCKAP1Q9Y2A7 1128 aa14.07□□□□□ -0.16
USF1-205ENST00000473969 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
USF1-205ENST00000473969 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
USF1-205ENST00000473969 DCLK1O15075 740 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 NRDCO43847 1150 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 ATP9BO43861 1147 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 GOT1P17174 413 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 ERCC2P18074 760 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 ACVRL1P37023 503 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 NDST2P52849 883 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 COPAP53621 1224 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 NAP1L1P55209 391 aaKnown RBP14.06□□□□□ -0.16
USF1-205ENST00000473969 CDH6P55285 790 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 DPYSL2Q16555 572 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 C9orf64Q5T6V5 341 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 LINGO4Q6UY18 593 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 KBTBD6Q86V97 674 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 LZTR1Q8N653 840 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 SUMF1Q8NBK3 374 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 KCTD6Q8NC69 237 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 OR8D1Q8WZ84 308 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 RUBCNQ92622 972 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 PSMB7Q99436 277 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 MTG2Q9H4K7 406 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 CD248Q9HCU0 757 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 ITM2CQ9NQX7 267 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 NDFIP2Q9NV92 336 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 CWC15Q9P013 229 aaKnown RBP14.06□□□□□ -0.16
USF1-205ENST00000473969 ZNF212Q9UDV6 495 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 SCML1Q9UN30 329 aa14.06□□□□□ -0.16
USF1-205ENST00000473969 CXorf51AA0A1B0GTR3 108 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 ARHGAP42A6NI28 874 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 RASA4BC9J798 803 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 RASA4O43374 803 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 BUB1O43683 1085 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 KDELR3O43731 214 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 MTA2O94776 668 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 ADH1BP00325 375 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 IL1BP01584 269 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 RETP07949 1114 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 SRCP12931 536 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 FECHP22830 423 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 SLC1A1P43005 524 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 DNA2P51530 1060 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 RPL6Q02878 288 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 SLC25A11Q02978 314 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 ELAVL3Q14576 367 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 MAP7D1Q3KQU3 841 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 PLK5Q496M5 336 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 ARTNQ5T4W7 220 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 FAM46CQ5VWP2 391 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 ASCL5Q7RTU5 278 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 KIAA1328Q86T90 577 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 STK40Q8N2I9 435 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 FAM160A2Q8N612 972 aaPredicted RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 ANP32BQ92688 251 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 PTPRN2Q92932 1015 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 LOXL4Q96JB6 756 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 ZC3H10Q96K80 434 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 CALR3Q96L12 384 aaKnown RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 ACE2Q9BYF1 805 aaPredicted RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 CEP44Q9C0F1 390 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 RSPH9Q9H1X1 276 aaPredicted RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 RCOR3Q9P2K3 495 aaPredicted RBP14.05□□□□□ -0.16
USF1-205ENST00000473969 NEU3Q9UQ49 428 aa14.05□□□□□ -0.16
USF1-205ENST00000473969 A0A0A6YYK5 440 aaPredicted RBP14.04□□□□□ -0.16
USF1-205ENST00000473969 IGHV1OR15-9A0A0B4J2B8 117 aa14.04□□□□□ -0.16
USF1-205ENST00000473969 C1QTNF3-AMACRE9PGA6 284 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms